CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007822.1-P	Field mustard	cytosol	97.68	98.12
CDX76779	Canola	cytosol	96.44	96.96
AT3G32400.2	Thale cress	cytosol	35.62	80.81
AT2G25050.1	Thale cress	cytosol	83.62	80.39
GSMUA_Achr1P25960_001	Banana	mitochondrion	12.73	68.1
GSMUA_Achr3P04690_001	Banana	cytosol	50.76	50.04
CDX99029	Canola	cytosol	0.71	50.0
CDY40774	Canola	cytosol	40.16	48.44
CDY27130	Canola	cytosol, mitochondrion	16.74	47.84
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	28.5	46.78
CDY02798	Canola	cytosol	20.3	46.53
CDY02799	Canola	cytosol	50.76	45.56
CDY32721	Canola	cytosol	50.31	45.42
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	59.13	45.11
CDY62689	Canola	cytosol	51.38	44.66
KRH05363	Soybean	cytosol	57.79	44.33
CDY49153	Canola	cytosol	40.96	43.89
CDY12361	Canola	cytosol	42.48	42.51
CDY14029	Canola	cytosol	46.57	42.49
CDY43877	Canola	cytosol	49.51	42.19
CDX99025	Canola	cytosol	43.28	41.68
CDX69994	Canola	plastid	43.45	41.11
GSMUA_Achr1P25970_001	Banana	cytosol	26.8	40.35
CDY12294	Canola	cytosol	43.45	40.03
CDX81069	Canola	nucleus	46.93	36.29
CDX69992	Canola	cytosol	24.13	35.8
CDX78309	Canola	nucleus	47.02	35.27
CDX69993	Canola	cytosol	36.33	33.64
CDX99026	Canola	cytosol	37.13	32.81
CDX99027	Canola	nucleus	16.38	21.32
CDY05170	Canola	extracellular, golgi, plasma membrane	12.91	19.46
CDY37849	Canola	endoplasmic reticulum	8.64	18.48
CDY27766	Canola	golgi, plasma membrane, vacuole	13.09	18.47
CDY22934	Canola	nucleus, plastid	11.93	18.38
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	10.15	18.15
CDY08720	Canola	mitochondrion	11.67	18.02
CDY43578	Canola	endoplasmic reticulum, extracellular	13.36	17.86
CDY36494	Canola	endoplasmic reticulum, vacuole	14.07	17.52
CDY18346	Canola	plasma membrane	13.45	17.32
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	12.2	17.19
CDX74146	Canola	extracellular, golgi, plasma membrane	12.29	17.19
CDX79799	Canola	mitochondrion, plastid, vacuole	12.11	17.13
CDY42470	Canola	plasma membrane	13.09	17.11
CDY43029	Canola	plasma membrane	13.09	17.03
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	12.38	17.01
CDY43811	Canola	golgi	12.91	17.0
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	11.93	16.77
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	11.58	16.75
CDY44259	Canola	plasma membrane, vacuole	12.56	16.73
CDX94358	Canola	mitochondrion, plastid	2.32	16.67
CDY17909	Canola	golgi, vacuole	12.56	16.63
CDX83457	Canola	golgi, plasma membrane, vacuole	12.47	16.61
CDY53556	Canola	nucleus	12.2	16.21
CDY70125	Canola	cytosol	6.86	16.04
CDY35941	Canola	plastid	10.69	16.02
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	14.78	15.68
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	11.04	15.66
CDY28040	Canola	plastid	10.69	15.58
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	14.87	15.52
CDX74041	Canola	golgi, plasma membrane, plastid	9.8	15.43
CDY16239	Canola	vacuole	9.62	15.38
CDY07990	Canola	golgi, plasma membrane, plastid	9.53	14.82
CDY55061	Canola	mitochondrion, nucleus	9.71	14.65
CDY24501	Canola	mitochondrion, nucleus	9.8	13.6
CDX85333	Canola	plasma membrane	9.88	13.49
CDX86310	Canola	endoplasmic reticulum, plasma membrane	9.62	13.38
CDY33614	Canola	mitochondrion, nucleus	9.17	13.38
CDY31597	Canola	mitochondrion	7.3	12.89

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	UniProt:A0A078HAI4	EnsemblPlants:CDY34742
ProteinID:CDY34742	ProteinID:CDY34742.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00057280001	InterPro:IPR014020
InterPro:IPR015425	InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
UniParc:UPI0004EE09F7	SEG:seg	:	:	:	:

Description

BnaA09g41090DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAI4]

Coordinates

chrLK032341:+:19010..24437

Molecular Weight (calculated)

124498.0 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.348

Length

1123 amino acids

Sequence
(BLAST)

0001: MALFRKFFYK KPPEGLVEIS ERVYVFDCCL TTDMLEEEEY RVYVGRIMSQ LREQFPGASF MVFNFRDGGE STSLMENVLS EHDMTTIMDY PRHYEGCPLL
0101: TMETVHHFLK SSENWLLLSQ QNILLAHCER GGWPVLAFML ASLLLYRKQF SGEEKTLEMM YKYAPRELLQ LMSPLNPLPS QLRFLRYVSS RSVGGHSQWP
0201: PLDRAVTLDC INLKLVPDFD GEGGCRPIFR IYGQDPFMAS DRTSKVLFSM PKRSKAVKHY KQADCEVVKI DINCHILGDV VLECITLDSD HEREEMMFRV
0301: VFNTAFLRSN ALLLNRDDID VLWNTTDRFP KGFRAEVIFS EMGAGNNHVS VDLTDMEEND GLPMEAFAKV QEIFSDGEWL DPNSDVAVTV FNQITAANIL
0401: QESLDSGSPR SPDSRSLLES ALEKVREKTK LMISENVAVS PDAFSPVWRE RDSDSCHRSY ADPNSLIKKV DEPQGLRVSV QRQAHSKIIS PRLLQSSVTS
0501: PVLNRSPTQG SSPASVSRFH SSPSSLGITS ILHDHGPGKG EEATSSSSPS ITFQPALHPL ILKASPSNGS PPAEAVVKPP TLPLLKPLKI LSPPPPPPPP
0601: PPASSSLRST ATQGPPPPPP PPPQRSAQPS FPSPPPLPPP KKVATTSNAP PPPPPPLRSK PLSGAAAPPV PPPPAPSALS RSQNGGCNGN VPPVPGPPLG
0701: LKGRGMLQAS LKGQGQTRKA NLKPYHWLKL TRALQGSLWA EAQQTPDEAA TAPEFDISEL EKLFSAAIPS SDNETKGGKS GRRGRPKVQK VQLIELRRAY
0801: NCEIMLSKVK IPLPDLMSSV LALDESVIDV DQVDNLIKFC PTKEEAELLK GYTGNKENLG RCEQFFLELL KVPRVETKLR VFSYKIQFHS QVTDLRRGLN
0901: IIHQAANEAS SAKLKRIMQT ILSLGNALNH GTARGSAIGF RLDSLLKLTD TRSRNNFSIV LAEKLPELLD FPKDLVSLEA ATKIQLKYLA EEMQAIRKGL
1001: EKVVLEFTTS ETDGPVSKHF RMNLKEFLSF AEGEVRSLAS LYSTVGGSAD ALALYFGEDP ARVPFEQVVS TLQNFVRIFV RSHEENCKQV EFEKRRVQKE
1101: AENEKLKKVL GTQKLHVPAP TIL

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.