CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22934	Canola	nucleus, plastid	79.05	91.63
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	72.66	76.85
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	71.95	76.29
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	39.76	72.1
CDX94358	Canola	mitochondrion, plastid	12.54	67.95
PGSC0003DMT400067386	Potato	cytosol	21.89	53.31
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	28.99	49.3
VIT_12s0059g02680.t01	Wine grape	golgi	42.6	44.94
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	33.96	44.22
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	41.78	42.53
KRH56076	Soybean	endoplasmic reticulum	42.01	42.16
CDY43811	Canola	golgi	41.89	41.5
CDY43029	Canola	plasma membrane	42.25	41.37
CDY42470	Canola	plasma membrane	41.66	40.98
CDY18346	Canola	plasma membrane	42.01	40.71
PGSC0003DMT400036332	Potato	plasma membrane	42.6	39.0
Solyc05g046120.2.1	Tomato	plasma membrane	42.25	38.89
Solyc07g052730.2.1	Tomato	golgi	43.31	38.32
GSMUA_Achr2P14090_001	Banana	mitochondrion	29.47	37.44
CDY70125	Canola	cytosol	19.88	35.0
Os02t0161100-01	Rice	golgi	36.21	34.73
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	33.61	33.41
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.74	33.3
Os07t0545500-01	Rice	plasma membrane	36.57	33.26
Os04t0100300-00	Rice	plasma membrane	32.19	33.05
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	32.66	33.01
TraesCS6B01G163200.1	Wheat	plasma membrane	32.9	32.94
CDY37849	Canola	endoplasmic reticulum	20.36	32.76
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	32.9	32.71
EES04559	Sorghum	plasma membrane	32.9	32.55
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	35.27	32.32
EES10325	Sorghum	golgi	35.86	31.43
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	35.03	31.29
TraesCS2B01G239500.1	Wheat	plasma membrane	34.2	30.71
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.2	30.55
TraesCS2D01G220300.1	Wheat	plasma membrane	34.32	30.3
Zm00001d024947_P005	Maize	plasma membrane	35.03	29.51
CDY05170	Canola	extracellular, golgi, plasma membrane	25.8	29.26
CDY08720	Canola	mitochondrion	24.73	28.75
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	34.67	28.23
CDY43578	Canola	endoplasmic reticulum, extracellular	28.05	28.21
CDX79799	Canola	mitochondrion, plastid, vacuole	26.51	28.21
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	34.2	28.17
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	33.96	27.92
CDY27766	Canola	golgi, plasma membrane, vacuole	26.27	27.89
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	34.56	27.86
Zm00001d015326_P003	Maize	mitochondrion, plastid	33.02	27.57
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.85	27.06
CDX83457	Canola	golgi, plasma membrane, vacuole	26.86	26.93
CDX74146	Canola	extracellular, golgi, plasma membrane	25.56	26.9
CDY36494	Canola	endoplasmic reticulum, vacuole	28.64	26.83
CDY17909	Canola	golgi, vacuole	26.86	26.77
CDY44259	Canola	plasma membrane, vacuole	26.63	26.69
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	24.85	26.52
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.56	26.44
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	19.53	26.27
CDY31597	Canola	mitochondrion	19.64	26.1
CDY16239	Canola	vacuole	21.54	25.93
CDY55061	Canola	mitochondrion, nucleus	22.72	25.81
CDY33614	Canola	mitochondrion, nucleus	21.89	24.03
CDY24501	Canola	mitochondrion, nucleus	22.49	23.49
CDY35941	Canola	plastid	20.12	22.7
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	28.88	22.68
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	28.4	22.66
CDY28040	Canola	plastid	20.59	22.6
CDX85333	Canola	plasma membrane	20.95	21.51
CDY07990	Canola	golgi, plasma membrane, plastid	18.22	21.33
CDX86310	Canola	endoplasmic reticulum, plasma membrane	20.0	20.94
CDX74041	Canola	golgi, plasma membrane, plastid	17.4	20.62
CDY27130	Canola	cytosol, mitochondrion	9.11	19.59
HORVU2Hr1G006690.1	Barley	peroxisome	14.2	13.75
CDX99025	Canola	cytosol	18.7	13.55
CDY12361	Canola	cytosol	17.75	13.37
CDY40774	Canola	cytosol	14.44	13.1
CDY14029	Canola	cytosol	18.82	12.92
CDX69994	Canola	plastid	17.63	12.55
CDX99029	Canola	cytosol	0.24	12.5
CDX76779	Canola	cytosol	16.33	12.35
CDY49153	Canola	cytosol	15.27	12.31
CDY32721	Canola	cytosol	17.99	12.22
CDY34742	Canola	cytosol	16.21	12.2
CDY02799	Canola	cytosol	17.75	11.99
CDY62689	Canola	cytosol	17.99	11.76
CDY12294	Canola	cytosol	16.92	11.73
CDX69993	Canola	cytosol	15.38	10.72
CDY43877	Canola	cytosol	16.69	10.7
CDX78309	Canola	nucleus	18.7	10.55
CDX81069	Canola	nucleus	17.87	10.4
CDX99026	Canola	cytosol	15.5	10.31
CDY02798	Canola	cytosol	4.62	7.96
CDX69992	Canola	cytosol	6.63	7.4
CDX99027	Canola	nucleus	4.38	4.29

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	GO:A0A078IUQ1	UniProt:A0A078IUQ1	EnsemblPlants:CDY53556	ProteinID:CDY53556
ProteinID:CDY53556.1	InterPro:FH2_Formin	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00010920001
InterPro:IPR015425	PFAM:PF02181	PRINTS:PR01217	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF195
SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0004EF4B5D	SEG:seg	:

Description

BnaC01g42160DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUQ1]

Coordinates

chrLK033213:-:50638..66014

Molecular Weight (calculated)

93603.8 Da

IEP (calculated)

10.033

GRAVY (calculated)

-0.563

Length

845 amino acids

Sequence
(BLAST)

001: MDSQQVRLDF LEDLLDVMAV GNPSDPTRQQ PSNPTNYFEN MNIFRRKHNE SFTTKHPLRR TFNNETYFDV TSSKELKDKN RDCLIYIPPR VAAANDDTYQ
101: KLSVLSGWFS NWFGPLLDST TSYPTRKLIG KQKRKRKKKR KKFRVSAPNF ALGPAPGFAP GPSPRFAPGP APTTPQSYDL VAPSSSPSQP PSYSPAEAPH
201: ESNFGGPTKK RAKSIVAPSQ SVPGPPPPPP PEKKNDILMD LIIAVASTAV LTFFLVALLF LCCFRRNNRK NAVGPRNGPR DEGPLLHLSD LSAGSNENSP
301: KVAATSRRFF TATSKKRSFL SRVSLKRNHH DFSPAEASSS SGLPLPPGRS SAAPPLPPAA PPAPRPPPPP PPKSKPPPPA PPKLVRPPPA PPKRQGRSSS
401: GDGSDVDSET GAPKTKLKPF FWDKMANPDQ KMVWHEISAG SFQFNEEEME SLFGYNDVNK NKNGQRGESS RDSPVQYIQI IDPRKAQNLS ILLRALNVTI
501: EEVVDAIKEG NELPVELLQT LLKMAPTSEE ELKLRLYSGD LHLLGPAERF LKILVDIPFA FKRIESLIFM ISLQEEVSGI KESLATLEVA CKKLKNSRLF
601: IKLLEAVLKT GNRMNVGTFR GDAQAFKLDT LLKLSDVKGT DGKTTLLHFV VLEIIRSEGV RALRLQRSSK SFSSVKTDDT NTDTKLEDVK RAAIIDADGL
701: ASTLMNLSGS LTNAREFLKS MDEESDFEKA LAGFIERADG DIKWLKEEEE RIMVLVKSSA DYFHGKSAKN EGLRLFAIVR DFLVMLEKVC REVKETTMMT
801: STKNHSGKKE TEMTPEGNQP DNIRRHLFPA IAERRADSSD GSDSD

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [extracellular,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.