Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G31810.1 | CDX74635 | AT5G35750.1 | 18642946 |
| AT1G31810.1 | CDY47297 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49153 | Canola | cytosol | 77.85 | 90.55 |
| CDY12361 | Canola | cytosol | 75.23 | 81.73 |
| AT1G31810.1 | Thale cress | cytosol | 78.75 | 78.05 |
| CDY27130 | Canola | cytosol, mitochondrion | 23.63 | 73.28 |
| Solyc08g075650.2.1 | Tomato | cytosol | 24.2 | 72.66 |
| PGSC0003DMT400079306 | Potato | cytosol | 23.95 | 72.46 |
| Os10t0119300-01 | Rice | mitochondrion | 24.77 | 72.42 |
| Solyc08g075670.1.1 | Tomato | cytosol | 27.73 | 67.6 |
| GSMUA_Achr5P13600_001 | Banana | extracellular | 16.16 | 66.33 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 49.96 | 65.34 |
| HORVU2Hr1G092520.9 | Barley | cytosol | 44.63 | 64.3 |
| KRH62678 | Soybean | cytosol | 58.16 | 58.79 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 62.26 | 58.07 |
| KRH39699 | Soybean | cytosol | 57.83 | 57.5 |
| CDX99029 | Canola | cytosol | 0.74 | 56.25 |
| KXG25260 | Sorghum | cytosol | 55.05 | 55.45 |
| GSMUA_Achr5P13590_001 | Banana | cytosol | 38.23 | 50.65 |
| CDY40774 | Canola | cytosol | 35.44 | 46.4 |
| CDX76779 | Canola | cytosol | 40.03 | 43.69 |
| CDY34742 | Canola | cytosol | 40.03 | 43.45 |
| CDY14029 | Canola | cytosol | 43.07 | 42.65 |
| CDX99025 | Canola | cytosol | 40.36 | 42.2 |
| CDY02798 | Canola | cytosol | 16.73 | 41.63 |
| CDX69994 | Canola | plastid | 40.11 | 41.2 |
| CDY32721 | Canola | cytosol | 40.36 | 39.55 |
| CDY02799 | Canola | cytosol | 40.44 | 39.41 |
| CDY62689 | Canola | cytosol | 41.67 | 39.32 |
| CDY43877 | Canola | cytosol | 39.95 | 36.95 |
| CDX81069 | Canola | nucleus | 42.49 | 35.67 |
| CDX78309 | Canola | nucleus | 42.9 | 34.94 |
| CDX69993 | Canola | cytosol | 33.31 | 33.47 |
| CDX99026 | Canola | cytosol | 33.72 | 32.34 |
| CDX69992 | Canola | cytosol | 19.77 | 31.84 |
| KRH15653 | Soybean | cytosol | 31.5 | 24.26 |
| CDX94358 | Canola | mitochondrion, plastid | 2.95 | 23.08 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 10.34 | 20.06 |
| CDX99027 | Canola | nucleus | 14.03 | 19.81 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 11.65 | 19.06 |
| CDY70125 | Canola | cytosol | 7.38 | 18.75 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 11.81 | 18.56 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 13.62 | 18.4 |
| CDY22934 | Canola | nucleus, plastid | 10.99 | 18.38 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 11.98 | 18.34 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 11.89 | 18.19 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.14 | 18.12 |
| CDY42470 | Canola | plasma membrane | 12.72 | 18.04 |
| CDY08720 | Canola | mitochondrion | 10.75 | 18.02 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 11.81 | 17.93 |
| CDY18346 | Canola | plasma membrane | 12.72 | 17.78 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 11.65 | 17.77 |
| CDY37849 | Canola | endoplasmic reticulum | 7.63 | 17.71 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 12.14 | 17.62 |
| CDY43029 | Canola | plasma membrane | 12.14 | 17.15 |
| CDY43811 | Canola | golgi | 11.98 | 17.12 |
| CDY35941 | Canola | plastid | 10.5 | 17.09 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 11.07 | 17.0 |
| CDY53556 | Canola | nucleus | 11.73 | 16.92 |
| CDY17909 | Canola | golgi, vacuole | 11.73 | 16.86 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 11.65 | 16.84 |
| CDY28040 | Canola | plastid | 10.58 | 16.75 |
| CDY44259 | Canola | plasma membrane, vacuole | 11.57 | 16.73 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 10.83 | 16.67 |
| CDY16239 | Canola | vacuole | 9.43 | 16.38 |
| CDY55061 | Canola | mitochondrion, nucleus | 9.76 | 15.99 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 9.19 | 15.71 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 9.27 | 15.65 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 13.54 | 15.58 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 13.62 | 15.43 |
| CDY24501 | Canola | mitochondrion, nucleus | 10.01 | 15.08 |
| CDY31597 | Canola | mitochondrion | 7.79 | 14.94 |
| CDY33614 | Canola | mitochondrion, nucleus | 9.35 | 14.81 |
| CDX85333 | Canola | plasma membrane | 8.61 | 12.76 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 8.29 | 12.52 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | UniProt:A0A078FH06 | EnsemblPlants:CDY12294 |
| ProteinID:CDY12294 | ProteinID:CDY12294.1 | ncoils:Coil | InterPro:FH2_Formin | EnsemblPlantsGene:GSBRNA2T00061364001 | InterPro:IPR014020 |
| InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 | PFAM:PF02181 | PFAM:PF10409 | PFscan:PS51181 |
| PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF334 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 |
| SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF49562 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase |
| UniParc:UPI0004EE6A6F | SEG:seg | : | : | : | : |
Description
BnaA09g24940DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH06]
Coordinates
chrLK032019:+:468786..474788
Molecular Weight (calculated)
135646.0 Da
IEP (calculated)
7.964
GRAVY (calculated)
-0.404
Length
1219 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADDLY QIFLHEVIND LHEDFPESSF LAFNFREGEK RSVFAETLCE YDVTVLEYPR QYEGCPLLPL
0101: SLIQHFLRVC ENWLSRGSRQ DVILLHCERG GWPLLAFVLA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NISPEWPPPE
0201: RSLSLDCVII RAIPNFDSQH GCRPIIRIFG RNYSCTSGLS TEMLYSMSNK KKPLRHYRQA QCDVIKIDIQ CWVQGDVVLE CVHMDLEPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NALPQKVPTP IVNGDETGGL PIEAFSKVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHRGGF YMNSPDSEEE TNTSSAADSS DEGFDAIHRP RISLSFDNDD PEGIPISFAP ESSAEPHEFS RGQQQEDQSK DSVQLSALPS SATLLPPPLP
0501: PPPPPLFSVN KTRCHPNPNP HLRRHLSLVS AVEIIQQHHT TLSTKPHHHH LLLHLSLEAF LHLQLHLLHH HHPRRLHLGA QEINFRCNPL HHLSLKAFLH
0601: LQLHHHPRHL RLGTQEIKFR RSHIHHHLLL LLLLNFSISP SSAPPPPPPP PFGNTGNKVQ AKPHPPPPPP PPPPIQASST KCVPSPPPPP PTSHSGLART
0701: GAPPPPPPPP PSSAKLGAPP PPPPPPRPPS SGKLGAPPPP PPPPLSKTPA PPPPPLSKTS APPPPPALGR GTSSCPPPLG AKGSNAPPPP PAAGRGRASS
0801: GLGRGRGVSV PTVAPKKTVL KPLHWSKVTR PAKGSLWADD TQKQENQPRA PEIDISELES LFSAVSDTAA KKSTARRGSS ISKPEKVQLV DLRRANNCEI
0901: MLTKIKIPLP DMLSAVLALD SSVLDIDQVE NLIKFCPTKE EMELLRNYTG DKEMLGKCEQ FFMELMKVPR IEAKLRVFGF KITFASQAED LKSCLNTIND
1001: ATKEVKESAK LRQIMQTILT LGNALNQGTA RGSAVGFKLE SLLKLSDTRA KNNKMTLMHY LCKLVGEKMP ELLDFPSDLA HLEAASKIDF KTLAEEMQAA
1101: AKGLEKVDHE LMASGNDGAI SLGFRKVLKE FLATAEAEVR LLASLYTESG RNADSLCHYF GEDPNRCPFE QVTKILALFM KTFIKSREEN EKQAEADKKK
1201: LEKDTMKEKP MLKKDGADP
0101: SLIQHFLRVC ENWLSRGSRQ DVILLHCERG GWPLLAFVLA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NISPEWPPPE
0201: RSLSLDCVII RAIPNFDSQH GCRPIIRIFG RNYSCTSGLS TEMLYSMSNK KKPLRHYRQA QCDVIKIDIQ CWVQGDVVLE CVHMDLEPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NALPQKVPTP IVNGDETGGL PIEAFSKVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHRGGF YMNSPDSEEE TNTSSAADSS DEGFDAIHRP RISLSFDNDD PEGIPISFAP ESSAEPHEFS RGQQQEDQSK DSVQLSALPS SATLLPPPLP
0501: PPPPPLFSVN KTRCHPNPNP HLRRHLSLVS AVEIIQQHHT TLSTKPHHHH LLLHLSLEAF LHLQLHLLHH HHPRRLHLGA QEINFRCNPL HHLSLKAFLH
0601: LQLHHHPRHL RLGTQEIKFR RSHIHHHLLL LLLLNFSISP SSAPPPPPPP PFGNTGNKVQ AKPHPPPPPP PPPPIQASST KCVPSPPPPP PTSHSGLART
0701: GAPPPPPPPP PSSAKLGAPP PPPPPPRPPS SGKLGAPPPP PPPPLSKTPA PPPPPLSKTS APPPPPALGR GTSSCPPPLG AKGSNAPPPP PAAGRGRASS
0801: GLGRGRGVSV PTVAPKKTVL KPLHWSKVTR PAKGSLWADD TQKQENQPRA PEIDISELES LFSAVSDTAA KKSTARRGSS ISKPEKVQLV DLRRANNCEI
0901: MLTKIKIPLP DMLSAVLALD SSVLDIDQVE NLIKFCPTKE EMELLRNYTG DKEMLGKCEQ FFMELMKVPR IEAKLRVFGF KITFASQAED LKSCLNTIND
1001: ATKEVKESAK LRQIMQTILT LGNALNQGTA RGSAVGFKLE SLLKLSDTRA KNNKMTLMHY LCKLVGEKMP ELLDFPSDLA HLEAASKIDF KTLAEEMQAA
1101: AKGLEKVDHE LMASGNDGAI SLGFRKVLKE FLATAEAEVR LLASLYTESG RNADSLCHYF GEDPNRCPFE QVTKILALFM KTFIKSREEN EKQAEADKKK
1201: LEKDTMKEKP MLKKDGADP
0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT
Arabidopsis Description
FH14Formin-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.