Factsheet for GSMUA_Achr5P13590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31810.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT1G31810.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT1G31810.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g075670.1.1	Tomato	cytosol	35.0	64.4
TraesCS2B01G406800.1	Wheat	cytosol	52.61	51.93
HORVU2Hr1G092520.9	Barley	cytosol	44.24	48.11
GSMUA_Achr1P25980_001	Banana	plasma membrane	14.02	45.58
KXG25260	Sorghum	cytosol	58.15	44.21
CDY49153	Canola	cytosol	46.63	40.94
Bra023204.1-P	Field mustard	cytosol	51.09	40.41
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	57.28	40.32
KRH62678	Soybean	cytosol	51.63	39.39
CDY12361	Canola	cytosol	47.5	38.95
AT1G31810.1	Thale cress	cytosol	52.07	38.94
GSMUA_Achr3P13420_001	Banana	cytosol	26.2	38.87
CDY12294	Canola	cytosol	50.65	38.23
KRH39699	Soybean	cytosol	50.87	38.17
GSMUA_Achr3P04690_001	Banana	cytosol	35.76	28.89
GSMUA_Achr1P25970_001	Banana	cytosol	22.93	28.28
Os10t0119300-01	Rice	mitochondrion	12.5	27.58
GSMUA_Achr6P16780_001	Banana	cytosol	32.83	25.75
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	25.22	24.92
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	27.28	23.2
KRH15653	Soybean	cytosol	38.37	22.3
Solyc08g075650.2.1	Tomato	cytosol	9.13	20.69
PGSC0003DMT400079306	Potato	cytosol	8.91	20.35
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	10.65	20.16
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	35.0	18.44
CDY27130	Canola	cytosol, mitochondrion	7.17	16.79
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	12.17	16.37
Bra038438.1-P	Field mustard	extracellular	4.46	13.53
GSMUA_Achr2P14090_001	Banana	mitochondrion	8.8	12.18
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	9.35	11.89
GSMUA_Achr11P...	Banana	mitochondrion, plastid	5.54	11.86
GSMUA_Achr7P18740_001	Banana	nucleus	6.41	11.57
GSMUA_Achr10P...	Banana	plastid	9.78	11.21
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	10.11	11.08
GSMUA_Achr5P25760_001	Banana	mitochondrion	4.89	10.25
GSMUA_Achr7P26240_001	Banana	cytosol	3.15	8.76
GSMUA_Achr8P22610_001	Banana	plasma membrane	7.17	8.71
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	5.65	8.01
GSMUA_Achr6P18370_001	Banana	nucleus	4.78	7.82
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	3.91	7.24
GSMUA_Achr7P23740_001	Banana	plastid	9.13	7.01
GSMUA_Achr4P07090_001	Banana	cytosol	2.93	5.87
GSMUA_Achr6P04430_001	Banana	cytosol	2.61	5.65
GSMUA_Achr5P13600_001	Banana	extracellular	1.09	3.37
GSMUA_Achr1P25960_001	Banana	mitochondrion	0.11	0.48

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	MapMan:35.1	ncoils:Coil	InterPro:FH2_Formin
EnsemblPlantsGene:GSMUA_Achr5G13590_001	EnsemblPlants:GSMUA_Achr5P13590_001	EnsemblPlants:GSMUA_Achr5T13590_001	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M0SY88	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF334	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF101447
SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI000296A166	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G13590_001]

Coordinates

chr5:+:9763037..9772197

Molecular Weight (calculated)

103366.0 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.369

Length

920 amino acids

Sequence
(BLAST)

001: MSLFSRFFYK RPPDGLLEFV DRVYVFDSCF STEVVPDGLY HIYLHEIVTE LHEEHADSSF LAFNFREGEK RSQFAEILCK YDVTIIDYPR QFEGCPLLPL
101: SLVHHFLRVS ESWLSLRNNQ NIILLHCERG GWPLLAFLLA CFLTFRKLHG TEQKTLDIVH REAPRGFLQL LSPLNPLPSQ LRYLQYVSRR NITPEWPPME
201: RALSLDCLIL RGIPSFDSEN GCRPLIRIFG HNIHKKDDLS SNTLFTTSKK KSLRHYQQED CDVIKIDIQC LVQGDVVLEC VHLDLDPDRE VMMFRIMFNT
301: AFIRSNILML NSDDVDILWD SKDRFPKGFR AEVLFGETEN ISPPRAPTAI LNGEVKGGLP IEAFEKVQEL FSGVEWFERN DDDAFWLLKQ ISANALQEKL
401: EKLILTDAKE ISRLQSKVGL QIPLMSPLES DEEKDSVTSD SVVSVDSEKV QHHSSISMDV ENILADSATQ DSDSTGDLIF HIFDWEHLIL FQKLLHLSLP
501: LPLHQRSNLN NPHHCRPHLK FLFCHHHLRH CRQHQSLLQE KMVNLRHFHH NPHHHHHHHL HLGPPYPLDV LQHQHHRHHH LLLCPPHLVK ESSSATTTTS
601: SVPASLCSIY QRSAATATAT TVSPSSSLHH ICTKSNKGSF LSPPPSFPVT AASNRSPPPP PPPPPPSSSL SHIDHGTVHA VPQPPPPPLK NGRGNAPGPP
701: PPPSFGSKGM PPPPPPQALK PPGLVPLPPP LQGGSHGVPA PPQPPGLKDL NTLAPPAPAS GRGRLIASSS GKGRGSLQSI PPKKTPLKPL HWVKVTRAMQ
801: GSLWADSQKQ ENQSRAPEID LSELESLFST TTASHESGRD KSGARRGTST TKPEIVHLID MRRANNCEIM LTKIKMPLPD MIHAVLALDT SVLEIDQVEN
901: LIKFCPTKEE MEMLKVKPQI

Best Arabidopsis Sequence Match ( AT1G31810.2 )
(BLAST)

0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT

Arabidopsis Description

FH14Formin-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.