Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g047770.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G31810.1 | Solyc07g047770.2.1 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069660.1.1 | Tomato | mitochondrion | 37.4 | 55.0 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 42.6 | 46.1 |
| Solyc07g005500.2.1 | Tomato | cytosol | 43.2 | 39.06 |
| HORVU2Hr1G092520.9 | Barley | cytosol | 62.6 | 37.0 |
| GSMUA_Achr5P13590_001 | Banana | cytosol | 64.4 | 35.0 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 62.6 | 33.58 |
| CDY49153 | Canola | cytosol | 67.0 | 31.97 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 75.4 | 28.84 |
| Bra023204.1-P | Field mustard | cytosol | 67.0 | 28.8 |
| KRH62678 | Soybean | cytosol | 68.0 | 28.19 |
| AT1G31810.1 | Thale cress | cytosol | 68.8 | 27.97 |
| CDY12294 | Canola | cytosol | 67.6 | 27.73 |
| KRH39699 | Soybean | cytosol | 66.8 | 27.24 |
| CDY12361 | Canola | cytosol | 60.6 | 27.01 |
| KXG25260 | Sorghum | cytosol | 62.6 | 25.87 |
| Solyc12g010110.1.1 | Tomato | cytosol | 43.2 | 16.63 |
| KRH15653 | Soybean | cytosol | 43.2 | 13.64 |
| Solyc12g019480.1.1 | Tomato | nucleus | 9.6 | 5.41 |
| GSMUA_Achr5P13600_001 | Banana | extracellular | 3.2 | 5.39 |
| Solyc08g014430.2.1 | Tomato | nucleus | 7.0 | 4.62 |
| Solyc02g092470.2.1 | Tomato | nucleus | 8.0 | 4.5 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 7.0 | 4.04 |
| Solyc10g006540.2.1 | Tomato | extracellular | 7.4 | 3.97 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 6.8 | 3.7 |
| Solyc07g052730.2.1 | Tomato | golgi | 7.0 | 3.66 |
| Solyc01g099650.2.1 | Tomato | nucleus | 6.6 | 3.65 |
| CDY27130 | Canola | cytosol, mitochondrion | 2.8 | 3.56 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 5.4 | 3.44 |
| Solyc06g082910.2.1 | Tomato | extracellular | 6.4 | 3.42 |
| Os10t0119300-01 | Rice | mitochondrion | 2.8 | 3.36 |
| PGSC0003DMT400079306 | Potato | cytosol | 2.6 | 3.23 |
| Solyc08g075650.2.1 | Tomato | cytosol | 2.6 | 3.2 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 5.2 | 2.86 |
| Solyc07g064010.2.1 | Tomato | golgi | 4.8 | 2.7 |
| Solyc07g005480.2.1 | Tomato | vacuole | 4.2 | 2.38 |
| Bra038438.1-P | Field mustard | extracellular | 1.4 | 2.31 |
| Solyc03g115680.2.1 | Tomato | plastid | 2.4 | 2.31 |
| Solyc06g069670.2.1 | Tomato | nucleus | 3.8 | 2.06 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 2.8 | 1.87 |
Protein Annotations
| EnsemblPlants:Solyc08g075670.1.1 | EnsemblPlantsGene:Solyc08g075670.1 | Gene3D:2.60.40.1110 | Gene3D:3.90.190.10 | InterPro:IPR014020 | InterPro:IPR029021 |
| InterPro:IPR029023 | InterPro:Prot-tyrosine_phosphatase-like | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF334 |
| PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | SEG:seg | SMART:SM01326 | SUPFAM:SSF49562 |
| SUPFAM:SSF52799 | UniParc:UPI000276B8B8 | UniProt:K4CMT4 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr8:-:59801653..59803515
Molecular Weight (calculated)
57265.6 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.194
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLSRFFYR RPPDGLLELD DRVYVFDSCF STEVLPEGIY QLYLHEIINE LHEEFPDSSF LAFNFREGEK RSQFAEILCE YDVTVMDYPR QYEGCPVLPL
101: SLIHHFLCIC ESWLSLQNHN NVILLHCERG GWPLLAFILA SFLVFRKLQS GERKTLEMVY REAPKGLSQL LSPLNPFPSQ LRYLQYISRR NISPEWPPPE
201: QALSLDCLIL RAIPRFDNQK GCRPIVRIFG RNLLSKDGLS THMLYSMPKK GRSLRHYRQK DSDVIKIDIQ CLVQGDVVLE CVHLDLDPER EVMMFRIVFN
301: TAFIRSNILM LNCDNLDILW DSKARYPKGF RAEVLFGDVE SISPLKAPTA ALNGEETGGL PIEAFSRVQE LFSGADWVDT GDDAALWLFK QLSVLNDMKD
401: LSILQSRMSG YSSPFDSEEE NNASSIADSL DFLDSEKASS VSYANTTDVN FLDEQDSASD GTSDPKISEG QMKLSKEFKF AIQGLPLLVR YLHHLRHLPL
101: SLIHHFLCIC ESWLSLQNHN NVILLHCERG GWPLLAFILA SFLVFRKLQS GERKTLEMVY REAPKGLSQL LSPLNPFPSQ LRYLQYISRR NISPEWPPPE
201: QALSLDCLIL RAIPRFDNQK GCRPIVRIFG RNLLSKDGLS THMLYSMPKK GRSLRHYRQK DSDVIKIDIQ CLVQGDVVLE CVHLDLDPER EVMMFRIVFN
301: TAFIRSNILM LNCDNLDILW DSKARYPKGF RAEVLFGDVE SISPLKAPTA ALNGEETGGL PIEAFSRVQE LFSGADWVDT GDDAALWLFK QLSVLNDMKD
401: LSILQSRMSG YSSPFDSEEE NNASSIADSL DFLDSEKASS VSYANTTDVN FLDEQDSASD GTSDPKISEG QMKLSKEFKF AIQGLPLLVR YLHHLRHLPL
0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT
Arabidopsis Description
FH14Formin-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.