Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g115680.2.1 | Tomato | plastid | 43.4 | 77.12 |
| TraesCS2D01G190800.1 | Wheat | cytosol | 28.03 | 63.48 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 28.03 | 63.48 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 28.03 | 63.48 |
| Solyc08g075650.2.1 | Tomato | cytosol | 25.76 | 58.62 |
| Solyc07g005480.2.1 | Tomato | vacuole | 31.39 | 32.81 |
| Solyc12g010110.1.1 | Tomato | cytosol | 28.79 | 20.48 |
| Solyc08g014430.2.1 | Tomato | nucleus | 12.55 | 15.32 |
| Solyc03g113710.2.1 | Tomato | endoplasmic reticulum, nucleus, plastid | 12.12 | 14.95 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 11.58 | 13.63 |
| Solyc01g099650.2.1 | Tomato | nucleus | 13.1 | 13.4 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 13.1 | 13.31 |
| Solyc02g092470.2.1 | Tomato | nucleus | 12.66 | 13.16 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 12.34 | 13.15 |
| Solyc12g019480.1.1 | Tomato | nucleus | 12.55 | 13.06 |
| Solyc10g006540.2.1 | Tomato | extracellular | 13.1 | 12.97 |
| Solyc07g064010.2.1 | Tomato | golgi | 12.12 | 12.6 |
| Solyc06g082910.2.1 | Tomato | extracellular | 12.55 | 12.39 |
| Solyc07g052730.2.1 | Tomato | golgi | 12.45 | 12.04 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 11.8 | 11.87 |
| Bra009307.1-P | Field mustard | cytosol | 9.2 | 10.53 |
| GSMUA_Achr7P26420_001 | Banana | cytosol, mitochondrion | 9.52 | 9.45 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 3.46 | 6.93 |
| Solyc07g005500.2.1 | Tomato | cytosol | 4.11 | 6.87 |
| HORVU2Hr1G034470.10 | Barley | cytosol | 8.33 | 6.64 |
| CDX69992 | Canola | cytosol | 4.65 | 5.68 |
| Zm00001d017027_P001 | Maize | cytosol | 1.19 | 4.6 |
| Solyc08g075670.1.1 | Tomato | cytosol | 2.06 | 3.8 |
| CDX99027 | Canola | nucleus | 2.27 | 2.43 |
| AT3G32420.1 | Thale cress | cytosol | 0.22 | 1.87 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 0.32 | 0.88 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 0.22 | 0.56 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 0.22 | 0.56 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 0.22 | 0.56 |
Protein Annotations
| EnsemblPlants:Solyc06g069670.2.1 | EnsemblPlantsGene:Solyc06g069670.2 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF218 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SMART:SM00498 |
| SUPFAM:SSF101447 | UniParc:UPI0002766B5F | UniProt:K4C8E0 | MapMan:20.2.2.6.2 | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:K4C8E0]
Coordinates
chr6:+:43387006..43400512
Molecular Weight (calculated)
99555.7 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.612
Length
924 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDDDNIETW KEELEHHAFQ DCSFVEGHRK LEENMDSTQQ ASKTNGLGDR DHLINSEAVI SDVSSRKDSV AQTSGANVMS QGDNKQDIEG PLSQERQGSQ
101: FTADINKGKN EKAPSSLKKQ LASSSKLAVD GIGPKNKSKQ KESQGTLSRL AKPNAVSRWI PSNKGSYTNS MHVAYPASRY KSAPPALAVT KDSQSGFKSK
201: SPSPRASSEA KILAGAGRIP KKRSSCPASL DMSTTVKEAP VAMTYSSESV ESQALDLQAS PSSPLPSFQY PSTLSLELPP IQEASTNMPA STMLPESSQK
301: DHIITASLTH HSSPPPPPPP PPPPPSQIPS HNQNVKSLSP PPPPPPPTNS LRKTQIGRPP PPPPPPGGAP PPPPPPGGGA PGPPPPPPPG GRAPGPPPPP
401: PPGGSAPGPP PPPGAPRAPG GGPPPPPPFG AKGPGAAGRG LPAGRAPALS RSRSNLKPLH WSKVTRALQG SLWEELQRHG GPQIAPEFDV SEIEILFSAT
501: PKASSAGKAG AKKKSADSKP DKVQLVDLRR ANNTEIMLTK VKMPLPDMMA AALAMDESIL DADQVENLIK FCPTKEEMDL LKGYTGDKEL LGKCEQFFLE
601: LMKVPRVESK LRVFLFKIQF KAQVTDFKKS LTTVNSACGE VRSSLKLKEI LKKILFLGNT LNQGTARGSA IGFKLDSLLK LADTRATNNK MTLMHYLCQV
701: LASKTPELLD FHESLVSMEA ASKIQLKSLA EEMQAIIKGL EKVKKELESS VNDGPVSEIF CKTLKEFIGA SEAEVGSLRD LYSVAGRNAD ALALYFNEDP
801: AKCPFEQVTA TLLNFVRLFR KAHEENLKQA EQDKKKVQKE AEMENAEKKQ LKKEGTLVLS QTRSLQYRSI GFGFLWAQER TSNIKAREPG NSRSALQRET
901: EKDTFLSGLL ECFAERSSRK HTVV
101: FTADINKGKN EKAPSSLKKQ LASSSKLAVD GIGPKNKSKQ KESQGTLSRL AKPNAVSRWI PSNKGSYTNS MHVAYPASRY KSAPPALAVT KDSQSGFKSK
201: SPSPRASSEA KILAGAGRIP KKRSSCPASL DMSTTVKEAP VAMTYSSESV ESQALDLQAS PSSPLPSFQY PSTLSLELPP IQEASTNMPA STMLPESSQK
301: DHIITASLTH HSSPPPPPPP PPPPPSQIPS HNQNVKSLSP PPPPPPPTNS LRKTQIGRPP PPPPPPGGAP PPPPPPGGGA PGPPPPPPPG GRAPGPPPPP
401: PPGGSAPGPP PPPGAPRAPG GGPPPPPPFG AKGPGAAGRG LPAGRAPALS RSRSNLKPLH WSKVTRALQG SLWEELQRHG GPQIAPEFDV SEIEILFSAT
501: PKASSAGKAG AKKKSADSKP DKVQLVDLRR ANNTEIMLTK VKMPLPDMMA AALAMDESIL DADQVENLIK FCPTKEEMDL LKGYTGDKEL LGKCEQFFLE
601: LMKVPRVESK LRVFLFKIQF KAQVTDFKKS LTTVNSACGE VRSSLKLKEI LKKILFLGNT LNQGTARGSA IGFKLDSLLK LADTRATNNK MTLMHYLCQV
701: LASKTPELLD FHESLVSMEA ASKIQLKSLA EEMQAIIKGL EKVKKELESS VNDGPVSEIF CKTLKEFIGA SEAEVGSLRD LYSVAGRNAD ALALYFNEDP
801: AKCPFEQVTA TLLNFVRLFR KAHEENLKQA EQDKKKVQKE AEMENAEKKQ LKKEGTLVLS QTRSLQYRSI GFGFLWAQER TSNIKAREPG NSRSALQRET
901: EKDTFLSGLL ECFAERSSRK HTVV
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
Arabidopsis Description
actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.