Factsheet for GSMUA_Achr5P25760_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26240_001	Banana	cytosol	48.06	63.75
GSMUA_Achr11P...	Banana	mitochondrion, plastid	62.19	63.49
PGSC0003DMT400056393	Potato	cytosol	57.18	52.29
GSMUA_Achr6P18370_001	Banana	nucleus	59.45	46.36
GSMUA_Achr4P07090_001	Banana	cytosol	46.47	44.35
Bra029655.1-P	Field mustard	cytosol	26.65	38.61
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	58.77	35.68
Os01t0897700-01	Rice	cytosol	18.68	33.61
Bra001256.1-P	Field mustard	plastid	29.16	33.6
GSMUA_Achr7P18740_001	Banana	nucleus	37.13	31.96
GSMUA_Achr10P...	Banana	plastid	58.31	31.88
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	35.76	31.59
KRH47952	Soybean	cytosol	55.58	31.44
AT3G25493.1	Thale cress	vacuole	11.16	30.62
Solyc12g019480.1.1	Tomato	nucleus	61.73	30.52
VIT_05s0094g00920.t01	Wine grape	nucleus	63.78	30.11
VIT_00s0227g00200.t01	Wine grape	cytosol	10.48	30.07
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	61.5	29.7
PGSC0003DMT400013717	Potato	plastid	57.63	29.38
OQU88036	Sorghum	extracellular, plasma membrane	62.64	29.26
Zm00001d012158_P001	Maize	extracellular, plasma membrane	63.1	29.13
CDX79799	Canola	mitochondrion, plastid, vacuole	52.62	29.09
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	49.66	28.87
Zm00001d042506_P002	Maize	extracellular, plasma membrane	62.87	28.87
KRH71295	Soybean	vacuole	57.4	28.64
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	54.44	28.49
CDX83457	Canola	golgi, plasma membrane, vacuole	54.21	28.23
Solyc06g082910.2.1	Tomato	extracellular	60.14	28.21
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	60.59	28.18
Solyc08g014430.2.1	Tomato	nucleus	48.52	28.14
TraesCS3A01G397900.1	Wheat	plasma membrane	60.82	28.13
KRH50174	Soybean	vacuole	57.18	28.01
TraesCS3D01G391800.1	Wheat	mitochondrion	60.59	27.94
TraesCS3B01G429900.1	Wheat	plasma membrane	60.59	27.88
HORVU3Hr1G089510.1	Barley	plasma membrane	60.36	27.87
GSMUA_Achr6P04430_001	Banana	cytosol	26.88	27.76
CDY17909	Canola	golgi, vacuole	53.53	27.71
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	53.08	27.19
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	55.35	27.18
CDY44259	Canola	plasma membrane, vacuole	51.94	27.05
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	54.21	26.59
Bra012246.1-P	Field mustard	cytosol	11.85	26.53
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	39.18	26.5
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	61.05	25.5
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	60.59	24.65
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	59.45	24.65
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	60.14	24.54
GSMUA_Achr2P14090_001	Banana	mitochondrion	37.13	24.51
GSMUA_Achr7P23740_001	Banana	plastid	66.29	24.27
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	60.14	24.2
KRH00989	Soybean	extracellular, golgi, vacuole	57.18	24.16
KRH40232	Soybean	endoplasmic reticulum, extracellular	56.49	23.92
AT5G48360.1	Thale cress	extracellular, vacuole	36.9	20.72
CDY35941	Canola	plastid	34.17	20.03
CDX74041	Canola	golgi, plasma membrane, plastid	30.98	19.07
CDY28040	Canola	plastid	33.26	18.96
CDX85333	Canola	plasma membrane	35.54	18.95
CDY07990	Canola	golgi, plasma membrane, plastid	30.98	18.84
CDX86310	Canola	endoplasmic reticulum, plasma membrane	34.4	18.71
GSMUA_Achr8P22610_001	Banana	plasma membrane	32.12	18.6
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	34.17	18.59
AT3G07540.1	Thale cress	plasma membrane	33.71	17.6
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	19.36	17.49
GSMUA_Achr1P25960_001	Banana	mitochondrion	7.52	15.71
GSMUA_Achr5P13600_001	Banana	extracellular	9.57	14.14
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	18.68	11.99
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	22.32	9.06
GSMUA_Achr3P04690_001	Banana	cytosol	21.87	8.43
GSMUA_Achr6P16780_001	Banana	cytosol	22.32	8.35
GSMUA_Achr1P25970_001	Banana	cytosol	10.71	6.3
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	22.55	5.67
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	10.93	5.16
GSMUA_Achr5P13590_001	Banana	cytosol	10.25	4.89
GSMUA_Achr1P25980_001	Banana	plasma membrane	1.59	2.47
GSMUA_Achr3P13420_001	Banana	cytosol	2.05	1.45

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	InterPro:FH2_Formin	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSMUA_Achr5G25760_001	EnsemblPlants:GSMUA_Achr5P25760_001	EnsemblPlants:GSMUA_Achr5T25760_001	InterPro:IPR015425	UniProt:M0T1Q1	PFAM:PF02181
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	SMART:SM00498	SUPFAM:SSF101447	TMHMM:TMhelix
UniParc:UPI000294E7B7	SEG:seg	:	:	:	:

Description

FH protein NFH1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25760_001]

Coordinates

chr5:+:26692840..26700280

Molecular Weight (calculated)

49563.2 Da

IEP (calculated)

8.389

GRAVY (calculated)

-0.141

Length

439 amino acids

Sequence
(BLAST)

001: MPSLFHNRRA LHVPFFPLPS ASPPAASPFP KYPFSSASSS SSSTSQQQHE SSKNVVGKSE ETPRPKLKPL LWDKVRASSD RAMVWDQLKS SSFQVNEEMI
101: ETLFISNATN TAPKEMNRRQ VLPSLTQENR VLDPKKSQNI AILLRALNVT KEEVCEALLE GNADSLGNEL LETLLKMAPS KEEELKLREY KDDSPVKLGP
201: AEKFLRAVLE IPFAFKRVDA MLYIANFDLE INYLKKSFET LEAACEELRS SRLFLKLLEA VLKTGNRMNV GTNRGDAHAF KLDTLLKLVD IKGTDGKTTL
301: LHFYFHGDSA KEEAHPFRIF MVVRDFLAIL DQVCKEVGRV NDHSFITSTK QQPAPVNRTL PPLFPRLHAL RSEISSSSIL IHICIMLMCS THNAMSLGCR
401: QCITHLYLYL QDALLLSLVL FLFLSLDGFI LNALVCRYY

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.