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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 96.22 89.15
CDY17909 Canola golgi, vacuole 91.56 85.73
CDX83457 Canola golgi, plasma membrane, vacuole 72.54 68.33
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 74.94 66.55
CDY44259 Canola plasma membrane, vacuole 70.53 66.43
GSMUA_Achr11P... Banana mitochondrion, plastid 31.23 57.67
GSMUA_Achr5P25760_001 Banana mitochondrion 29.09 52.62
Os01t0897700-01 Rice cytosol 15.99 52.05
GSMUA_Achr6P18370_001 Banana nucleus 34.51 48.67
CDX94358 Canola mitochondrion, plastid 8.44 42.95
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 35.77 42.32
VIT_05s0094g00920.t01 Wine grape nucleus 48.74 41.61
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 39.42 41.46
Solyc12g019480.1.1 Tomato nucleus 46.22 41.33
PGSC0003DMT400013717 Potato plastid 44.21 40.77
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 40.3 40.61
Solyc08g014430.2.1 Tomato nucleus 38.66 40.55
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 40.18 40.53
GSMUA_Achr10P... Banana plastid 40.93 40.47
KRH71295 Soybean vacuole 44.71 40.34
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 39.92 40.33
Zm00001d021173_P001 Maize plasma membrane 38.41 40.03
TraesCS5A01G304700.1 Wheat golgi 39.55 39.9
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 36.27 39.83
KRH50174 Soybean vacuole 44.71 39.62
CDY37849 Canola endoplasmic reticulum 26.07 39.43
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 40.05 37.41
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 39.42 37.31
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 39.55 37.29
CDY08720 Canola mitochondrion 33.63 36.73
OQU88036 Sorghum extracellular, plasma membrane 43.2 36.49
Zm00001d042506_P002 Maize extracellular, plasma membrane 43.7 36.3
Zm00001d012158_P001 Maize extracellular, plasma membrane 43.32 36.17
TraesCS3A01G397900.1 Wheat plasma membrane 42.32 35.41
TraesCS3D01G391800.1 Wheat mitochondrion 42.44 35.4
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 46.85 35.13
TraesCS3B01G429900.1 Wheat plasma membrane 42.19 35.12
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 47.48 35.04
HORVU3Hr1G089510.1 Barley plasma membrane 41.94 35.02
CDY43578 Canola endoplasmic reticulum, extracellular 37.03 35.0
CDY36494 Canola endoplasmic reticulum, vacuole 39.55 34.81
TraesCS1D01G010200.1 Wheat plastid 23.93 33.45
TraesCS1B01G059400.1 Wheat plastid 23.68 33.39
CDY70125 Canola cytosol 20.15 33.33
TraesCS1A01G011800.1 Wheat extracellular 22.29 33.21
HORVU1Hr1G002300.8 Barley plastid 28.59 31.35
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 31.74 30.36
CDX74041 Canola golgi, plasma membrane, plastid 26.7 29.73
CDY07990 Canola golgi, plasma membrane, plastid 26.95 29.64
CDY35941 Canola plastid 27.83 29.51
CDY22934 Canola nucleus, plastid 27.08 29.49
CDY28040 Canola plastid 28.21 29.09
CDY05170 Canola extracellular, golgi, plasma membrane 27.08 28.86
CDX86310 Canola endoplasmic reticulum, plasma membrane 28.97 28.5
CDX85333 Canola plasma membrane 29.47 28.43
GSMUA_Achr7P23740_001 Banana plastid 42.32 28.02
CDY27766 Canola golgi, plasma membrane, vacuole 28.09 28.02
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 28.09 27.98
EES17525 Sorghum endoplasmic reticulum, plasma membrane 28.84 27.96
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 27.83 27.66
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 28.97 27.41
CDX74146 Canola extracellular, golgi, plasma membrane 27.71 27.4
CDY43811 Canola golgi 29.22 27.2
CDY42470 Canola plasma membrane 29.35 27.12
CDY43029 Canola plasma membrane 29.47 27.11
CDY40709 Canola endoplasmic reticulum, plasma membrane, vacuole 27.83 27.05
CDY18346 Canola plasma membrane 29.47 26.83
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 26.2 26.8
CDY53556 Canola nucleus 28.21 26.51
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 25.44 25.51
CDY16239 Canola vacuole 22.04 24.93
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 19.4 24.52
CDY31597 Canola mitochondrion 19.4 24.21
CDY55061 Canola mitochondrion, nucleus 22.42 23.92
CDY33614 Canola mitochondrion, nucleus 21.66 22.34
CDY24501 Canola mitochondrion, nucleus 22.04 21.63
CDY27130 Canola cytosol, mitochondrion 9.32 18.83
CDX99029 Canola cytosol 0.38 18.75
Zm00001d035757_P003 Maize plasma membrane 28.97 13.67
CDY40774 Canola cytosol 14.99 12.78
CDY49153 Canola cytosol 16.37 12.4
CDX76779 Canola cytosol 17.38 12.35
CDX99025 Canola cytosol 18.01 12.26
CDY12361 Canola cytosol 17.25 12.21
CDY34742 Canola cytosol 17.13 12.11
CDY14029 Canola cytosol 18.26 11.78
CDX69994 Canola plastid 17.25 11.54
CDY12294 Canola cytosol 17.0 11.07
CDY32721 Canola cytosol 16.5 10.53
CDY02799 Canola cytosol 16.5 10.47
CDX69993 Canola cytosol 15.74 10.3
CDY62689 Canola cytosol 16.75 10.29
CDX81069 Canola nucleus 17.88 9.78
CDX78309 Canola nucleus 18.39 9.75
CDX99026 Canola cytosol 15.37 9.6
CDY43877 Canola cytosol 15.37 9.26
CDY02798 Canola cytosol 4.16 6.73
CDX69992 Canola cytosol 6.3 6.61
CDX99027 Canola nucleus 5.16 4.75
Protein Annotations
EnsemblPlants:CDX79799EnsemblPlantsGene:GSBRNA2T00132629001Gene3D:1.20.58.2220GO:A0A078CUU6InterPro:FH2_ForminInterPro:IPR015425
ncoils:CoilPANTHER:PTHR23213PANTHER:PTHR23213:SF276PFAM:PF02181PFscan:PS51444ProteinID:CDX79799
ProteinID:CDX79799.1SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI0004EED7B3MapMan:20.2.2.6.1::::
Description
BnaA05g03570D
Coordinates
chrLK031819:-:207279..210257
Molecular Weight (calculated)
87660.2 Da
IEP (calculated)
9.432
GRAVY (calculated)
-0.499
Length
794 amino acids
Sequence
(BLAST)
001: MSRIPSLLRF ATILFLFSSS SSSADQRLHS RHLLHQPFFP IPTAAPPPYQ PPPPSSEPPS PSPRSHHHHK NHPETPPPHE KHPFSSASNP PPPPPPPPSP
101: PHPNTFFPSS DPSSPTSHPP PSPSPPHRAP VPTFPANISS LVFPTHNKPH NSNPHVAKLL AITIAVVSAA ILLSLLAVAT IFLRRHRRRA SPAKSTKTDA
201: RHLFNAAPSD VPLKHKQPPK YASSNTSSEF LYLGTLVNSG LVDQQKSPEA SPASWTYHQL RALPPLLPLT RKVLRFVSRA RHVLKPPKSS LSPRLSLNSS
301: NGSVSKKPVP TRPPPPPPPQ IHVLPATNSV SEEKDETFKP KLKPLHWDKV RASSSRVTVW DQIKSNSFQV NEEMIETLFR ANDPTSRTKE SVTTDVVQST
401: SHQFLDPRKS HNIAILLRAL NVTADEVCEA LVEGNSDALG SELLQCLLKM APTKEEEDKL KELKEDDDES SPSKTGPAER FLRQLLNIPL AFKRINAMLY
501: IVNFESETEY LKRSFHTLEA ACGELRNTRM FLKLLEAVLK TGNRMNIGTN RGDAHAFKLD TLLKLVDIKG ADGKTTLLHF VVQEIIKSEG ARVSTTPTQS
601: PVGVNMAEQS AFQDDLELKK LGLQVVSGLS SQLTNVKKAA AMDSTSLSDE AAELSKGITK VKEVIMELKQ ETGVERFLDS MNSFLNKAEK EITEVQSHGD
701: NVLKMVKEVT EYFHGNSESH PSRIFTVVRD FLTVLDQVCK EVGRVNERTV YGSVPRASTS NQVVTPLFPV ANNDNNSEKS HSGSLDQEED EDLF
Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.