Factsheet for TraesCS5D01G311600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	96.18	96.06
TraesCS5A01G304700.1	Wheat	golgi	95.29	95.17
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	81.17	95.08
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	74.94	74.75
Zm00001d021173_P001	Maize	plasma membrane	68.96	71.13
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	73.66	68.12
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	70.74	66.03
PGSC0003DMT400056393	Potato	cytosol	33.08	54.17
VIT_00s0227g00200.t01	Wine grape	cytosol	9.8	50.33
Bra029655.1-P	Field mustard	cytosol	18.19	47.19
Bra012246.1-P	Field mustard	cytosol	11.07	44.39
AT3G25493.1	Thale cress	vacuole	8.65	42.5
Bra001256.1-P	Field mustard	plastid	20.48	42.26
CDX79799	Canola	mitochondrion, plastid, vacuole	40.33	39.92
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	38.17	39.74
Solyc12g019480.1.1	Tomato	nucleus	44.02	38.96
PGSC0003DMT400013717	Potato	plastid	42.24	38.56
KRH47952	Soybean	cytosol	38.04	38.53
Solyc08g014430.2.1	Tomato	nucleus	37.02	38.44
VIT_05s0094g00920.t01	Wine grape	nucleus	45.17	38.17
CDY17909	Canola	golgi, vacuole	40.71	37.74
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	41.09	37.69
KRH71295	Soybean	vacuole	42.11	37.61
CDX83457	Canola	golgi, plasma membrane, vacuole	39.69	37.01
KRH50174	Soybean	vacuole	42.11	36.94
TraesCS3D01G391800.1	Wheat	mitochondrion	43.64	36.03
TraesCS4D01G257700.1	Wheat	plasma membrane	40.46	35.89
Solyc06g082910.2.1	Tomato	extracellular	42.62	35.79
CDY44259	Canola	plasma membrane, vacuole	38.3	35.71
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	40.97	35.42
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	42.24	35.17
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	39.95	35.12
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	39.44	34.64
TraesCS1D01G010200.1	Wheat	plastid	24.43	33.8
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	45.67	33.27
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	44.66	33.14
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	44.27	33.11
TraesCS1D01G329400.1	Wheat	plastid	35.11	33.09
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.04	32.9
KRH00989	Soybean	extracellular, golgi, vacuole	43.13	32.63
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.17	32.54
KRH40232	Soybean	endoplasmic reticulum, extracellular	42.88	32.5
CDX74041	Canola	golgi, plasma membrane, plastid	27.35	30.15
CDY07990	Canola	golgi, plasma membrane, plastid	27.35	29.78
CDY35941	Canola	plastid	28.12	29.51
AT5G48360.1	Thale cress	extracellular, vacuole	29.26	29.41
CDX85333	Canola	plasma membrane	30.41	29.04
CDY28040	Canola	plastid	28.24	28.83
CDX86310	Canola	endoplasmic reticulum, plasma membrane	29.52	28.75
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	29.26	28.5
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	29.9	27.91
AT3G07540.1	Thale cress	plasma membrane	28.5	26.64
TraesCS5D01G089100.1	Wheat	cytosol	10.18	26.14
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	26.97	24.94
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	27.99	24.42
TraesCS2D01G220300.1	Wheat	plasma membrane	28.24	23.2
TraesCS2D01G386600.1	Wheat	cytosol	11.07	22.66
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	28.5	21.83
TraesCS2D01G190800.1	Wheat	cytosol	11.32	21.81
TraesCS1D01G077900.1	Wheat	cytosol	21.5	12.06
TraesCS6D01G339300.1	Wheat	cytosol	18.19	10.71
TraesCS4D01G237900.1	Wheat	plastid	9.16	7.95
TraesCS2D01G386500.1	Wheat	cytosol	4.33	7.01
TraesCS2D01G190700.1	Wheat	cytosol	2.8	6.2
TraesCS7D01G150000.1	Wheat	mitochondrion	3.94	5.3

Protein Annotations

EnsemblPlants:TraesCS5D01G311600.1	EnsemblPlantsGene:TraesCS5D01G311600	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213
PANTHER:PTHR23213:SF261	PFAM:PF02181	PFscan:PS51444	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	MapMan:20.2.2.6.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:407962589..407965525

Molecular Weight (calculated)

84596.6 Da

IEP (calculated)

9.847

GRAVY (calculated)

-0.324

Length

786 amino acids

Sequence
(BLAST)

001: MPMPMPARRR LLVLVLLHLL FLLPSSSSAS LHRRRDGSHH QWHGGRRALH EPLFPLESAP ALPPPPPAPF FPFLPDAAPP QPPTVANPAP AAVGVGDVGA
101: GGDPSSSSLP NPTAPANMSS LALPVPRSTP APLRAFLSSH RLLTVLLLVA AVASAVLAAA LVYLLARRRR GRPEPEPEAY EKPALPKPST AKPALHDDDQ
201: HPRGSTATIS STSSPELRPM PPLPRQFQQQ ARMSPLSSPI LEDRIGNIRA PPVSVPPPAP PPPPPPPMPP SKGNGRAQTA PAPPTPPPLL PRAGNGSGWL
301: PRRLSERPAP TVIRASAGAV HPEESPQSEE KDVDAGAAAL PKLKPLHWDK FRASSGRPTV WDQLKASSFR VNEEMIETLF VSNSTRRMPK NGFKEANGAP
401: FNQENKVLDA KKSQNIAIML RALDATKEEV CKALLDGQAD SLGTELLEML LKMAPTREEE LKLREYREDA QSKLGPAESF LKAVLGIPFA FKRAEAMLYI
501: ANFDSEVDYL KTAFKTLEAA CEELRGSRLF HKILDAVLKT GNRMNTGTNR GNAHAFKLDS LLKLVDIKGT DGKTTLLHFV IEEITKSEGA NIVATSPTKD
601: KASTVADDFQ CKKVGLKIVA SLGGELSNVK KAAGMDSDSL ASCVSKLSAG VSKISDVLQL NQQLGSDERC KRFRASIGEF LQKAEAEITA VQAQEGLALS
701: LVRETTEFFH GNSAKEEGHP LRIFMVVRDF LAVLDRVCKD VSRMNERKAP VGFSTSRRVE AAAVPPQFSA AAQSSSSEEE TSSSSS

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.