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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g082910.2.1 Tomato extracellular 95.02 95.83
PGSC0003DMT400056393 Potato cytosol 40.25 79.17
VIT_00s0227g00200.t01 Wine grape cytosol 11.12 68.63
GSMUA_Achr11P... Banana mitochondrion, plastid 30.08 66.05
GSMUA_Achr6P18370_001 Banana nucleus 36.33 60.92
GSMUA_Achr5P25760_001 Banana mitochondrion 28.18 60.59
Os01t0897700-01 Rice cytosol 15.25 59.02
PGSC0003DMT400083315 Potato cytosol 10.91 55.38
KRH47952 Soybean cytosol 45.13 54.9
AT3G25493.1 Thale cress vacuole 9.22 54.38
KRH06515 Soybean endoplasmic reticulum, plastid, vacuole 57.31 50.14
Bra029655.1-P Field mustard cytosol 15.68 48.84
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 54.56 48.63
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 55.08 48.33
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 55.3 47.85
PGSC0003DMT400013717 Potato plastid 43.54 47.74
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 36.55 47.72
GSMUA_Achr10P... Banana plastid 40.57 47.7
AT3G25500.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 52.75 47.38
KRH00989 Soybean extracellular, golgi, vacuole 51.48 46.78
KRH40232 Soybean endoplasmic reticulum, extracellular 51.06 46.48
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 36.86 46.09
Bra012246.1-P Field mustard cytosol 9.53 45.92
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 32.52 45.75
OQU88036 Sorghum extracellular, plasma membrane 45.55 45.74
Zm00001d042506_P002 Maize extracellular, plasma membrane 46.08 45.5
Zm00001d012158_P001 Maize extracellular, plasma membrane 45.76 45.43
Bra001256.1-P Field mustard plastid 17.9 44.36
HORVU3Hr1G089510.1 Barley plasma membrane 44.07 43.74
TraesCS3A01G397900.1 Wheat plasma membrane 43.96 43.73
TraesCS3B01G429900.1 Wheat plasma membrane 44.17 43.71
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 38.67 43.5
Zm00001d021173_P001 Maize plasma membrane 34.85 43.18
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 35.81 42.89
TraesCS5A01G304700.1 Wheat golgi 35.28 42.31
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 35.17 42.24
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 35.17 42.19
PGSC0003DMT400036575 Potato mitochondrion 12.71 41.96
PGSC0003DMT400067386 Potato cytosol 15.36 41.79
TraesCS3D01G391800.1 Wheat mitochondrion 41.95 41.6
PGSC0003DMT400039073 Potato cytosol 11.76 41.11
PGSC0003DMT400055250 Potato vacuole 38.03 40.52
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 36.12 40.5
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 36.23 40.24
PGSC0003DMT400038519 Potato endoplasmic reticulum 36.02 38.59
TraesCS1D01G010200.1 Wheat plastid 22.99 38.2
TraesCS1B01G059400.1 Wheat plastid 22.56 37.83
TraesCS1A01G011800.1 Wheat extracellular 20.23 35.83
CDY35941 Canola plastid 28.07 35.38
AT5G48360.1 Thale cress extracellular, vacuole 29.13 35.17
CDX85333 Canola plasma membrane 30.51 34.99
CDX86310 Canola endoplasmic reticulum, plasma membrane 29.87 34.94
CDX74041 Canola golgi, plasma membrane, plastid 26.38 34.92
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 29.77 34.82
PGSC0003DMT400031544 Potato cytosol 16.74 34.8
CDY28040 Canola plastid 28.07 34.42
CDY07990 Canola golgi, plasma membrane, plastid 25.85 33.8
GSMUA_Achr7P23740_001 Banana plastid 42.27 33.28
HORVU1Hr1G002300.8 Barley plastid 25.32 33.01
AT3G07540.1 Thale cress plasma membrane 28.6 32.1
PGSC0003DMT400063542 Potato extracellular, golgi, plasma membrane 28.92 30.33
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 26.48 30.12
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 25.85 29.08
EES17525 Sorghum endoplasmic reticulum, plasma membrane 24.47 28.21
PGSC0003DMT400058304 Potato plasma membrane 23.83 28.12
PGSC0003DMT400036332 Potato plasma membrane 27.33 27.95
PGSC0003DMT400049488 Potato golgi, plasma membrane, vacuole 25.21 27.32
PGSC0003DMT400063186 Potato plastid 21.82 27.28
PGSC0003DMT400063143 Potato cytosol 8.16 24.52
PGSC0003DMT400029052 Potato cytosol 6.89 23.55
PGSC0003DMT400079306 Potato cytosol 9.64 22.58
PGSC0003DMT400020452 Potato cytosol 3.18 18.18
PGSC0003DMT400083163 Potato cytosol, mitochondrion, nucleus 2.01 15.45
Zm00001d035757_P003 Maize plasma membrane 24.89 13.96
PGSC0003DMT400079305 Potato cytosol, mitochondrion, plastid 5.93 7.16
Protein Annotations
EnsemblPlants:PGSC0003DMT400071147EnsemblPlantsGene:PGSC0003DMG400027669EntrezGene:102591335Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213PANTHER:PTHR23213:SF261PFAM:PF02181
PFscan:PS51444PGSC:PGSC0003DMG400027669RefSeq:XP_006366813.1SEG:segSMART:SM00498SUPFAM:SSF101447
TMHMM:TMhelixUniParc:UPI000296C237UniProt:M1CN93MapMan:20.2.2.6.1::
Description
FH protein NFH2 [Source:PGSC_GENE;Acc:PGSC0003DMG400027669]
Coordinates
chr6:+:57915453..57919498
Molecular Weight (calculated)
103554.0 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.449
Length
944 amino acids
Sequence
(BLAST)
001: MVVSFFFIFF LCFSPQYYYL SFATTAAAVF SGNNRRVLHE PFFPLDSPPP SSQPPIPSPP APTEYPFQGS TTTPDNSDNN PFFPTYPSPP LPPDSPADFV
101: PANVSSIILP NTSKSNPVSN KLIVTAIISV LAAVIVLSIA IFLHIRKRRK QSDRKTQRSD SNSNGLSRDG ARSDGNNGVP KLQRPSQTSS EFLYLGTLAS
201: SHGGVETHNA QNRNGSNTSS TPSSRKMDSP ELRPLPPLHG RNLRQSYGNT RFFSGTAEND VDFYSSAGSM GGRESSIGGD SLSRRDFSAV EVEKFVGCSS
301: SSSSSSSSSG SGSPVRSVSL SISPPASLSP ERKSVRPKSP ELVAVDTAPP PQYPPPPPPP PATIVPPFAE SPSPSPSPPC PLSPERYSTR SMDSSPGIFN
401: LLDQDVQFPA RIRNHIQQAT PAFGPPPPRP PPPPPPRSKN MESPKTPSPP FSKPAFNPPV LESPLKPIGI ESPVLVSPME LPSISEHIEK NDEKTEEPKP
501: KLKTLHWDKV RASSDREMVW DQLKSSSFKL NEEMIETLFV VKTPTLNAND TARRLVPSPS QENRVLDPKK AQNIAILLRA INVTTEEICE ALLEGNAETI
601: GTELLEILLK MAPSKEEERK LKEYKDDSPV KLGPAEKFLK AVLDVPFAFK RVDAMLYISN FDYEVDYLRK SFETLEAACE ELRSSRMFLK LLEAVLKTGN
701: RMNVGTNRGD AHAFKLDTLL KLVDVKGADG KTTLLHFVVQ EIIKGEGTRL SGGDQNEQCT TNDDAKYRKL GLQVVSNITS ELIHVKNAAA MDSEVLHSDV
801: LKLSKGIGNI TEVAGYIEAV GSEESSTKKF SESMNRFMEI AEEKIIRLQA QEALAMSLVK EITEYFHGDS AREEAHPFRT FMVVKDFLMI LDRVCKEVGM
901: INERTVVSSA HKFPVPVNPN LQPVTSSYTA KRQHSSSDDE YLSS
Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.