Factsheet for PGSC0003DMT400063542

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099650.2.1	Tomato	nucleus	95.89	95.57
GSMUA_Achr7P18740_001	Banana	nucleus	33.56	59.22
KRG92894	Soybean	endoplasmic reticulum, vacuole	55.44	55.94
PGSC0003DMT400083315	Potato	cytosol	11.56	55.91
KRG96818	Soybean	plasma membrane	47.78	54.36
KRH33895	Soybean	plasma membrane	55.33	54.19
KRH68527	Soybean	plasma membrane	46.44	52.58
VIT_14s0060g02330.t01	Wine grape	golgi, plasma membrane, vacuole	55.44	52.09
CDY05170	Canola	extracellular, golgi, plasma membrane	41.78	50.47
CDY27766	Canola	golgi, plasma membrane, vacuole	44.44	50.25
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	45.67	50.18
CDX74146	Canola	extracellular, golgi, plasma membrane	43.78	49.07
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	44.56	48.72
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.22	48.71
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	46.78	47.62
PGSC0003DMT400056393	Potato	cytosol	24.44	45.83
PGSC0003DMT400036575	Potato	mitochondrion	13.56	42.66
PGSC0003DMT400067386	Potato	cytosol	15.78	40.92
PGSC0003DMT400039073	Potato	cytosol	11.89	39.63
Os04t0461800-01	Rice	extracellular	36.33	39.26
TraesCS2B01G344200.1	Wheat	golgi	36.44	39.19
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	36.56	39.07
Zm00001d003406_P002	Maize	plasma membrane	34.89	37.34
EES12298	Sorghum	plasma membrane	34.67	36.62
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	36.78	36.45
Zm00001d032225_P001	Maize	golgi	35.56	35.87
EES13879	Sorghum	golgi	36.0	35.68
PGSC0003DMT400031544	Potato	cytosol	17.56	34.8
Os08t0431200-00	Rice	cytosol	19.78	34.23
PGSC0003DMT400055250	Potato	vacuole	32.44	32.96
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	27.33	32.58
PGSC0003DMT400038519	Potato	endoplasmic reticulum	31.22	31.9
PGSC0003DMT400013717	Potato	plastid	29.56	30.89
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	30.33	28.92
PGSC0003DMT400058304	Potato	plasma membrane	24.33	27.38
PGSC0003DMT400063186	Potato	plastid	22.67	27.02
PGSC0003DMT400036332	Potato	plasma membrane	27.67	26.98
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	26.0	26.87
PGSC0003DMT400063143	Potato	cytosol	8.11	23.25
PGSC0003DMT400029052	Potato	cytosol	6.89	22.46
PGSC0003DMT400079306	Potato	cytosol	9.56	21.34
PGSC0003DMT400020452	Potato	cytosol	3.44	18.79
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	1.56	11.38
PGSC0003DMT400079305	Potato	cytosol, mitochondrion, plastid	5.44	6.27

Protein Annotations

EnsemblPlants:PGSC0003DMT400063542	EnsemblPlantsGene:PGSC0003DMG400024706	EntrezGene:102605377	Gene3D:1.20.58.2220	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF177
PFAM:PF02181	PFscan:PS51444	PGSC:PGSC0003DMG400024706	RefSeq:XP_006344840.1	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI00029570A3	UniProt:M1CAS4	MapMan:20.2.2.6.1	:

Description

Formin 11 [Source:PGSC_GENE;Acc:PGSC0003DMG400024706]

Coordinates

chr1:+:77385989..77389214

Molecular Weight (calculated)

99429.1 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.343

Length

900 amino acids

Sequence
(BLAST)

001: MGHHGFRILL HFLFIITFIL VSFCCTHILV RDVSLNAAKY LNSIHGFKEL NYMVRNGDGN ESPIGKIYGG KQILIVEKFR TLLGLSRFSP RNGDFAYFAV
101: SPSPSPSPSI SPEAPAPSPV PRVHRHPHPH SHHHPFIPAA HRVRVKRRGR STRVLTAVLV SAGISTVLCA IALFWGCKKF KKQRKKSTRS VSLFSSEAGS
201: VCRSRYGSSQ NSVKKVTSDP GPDLFYLDSL EVALESSESI CLNKSSVIEK IDSNENIANN TLSEKDEQEE EISVSMPDDD NCSGVGEIVC VYESADSMKC
301: DINDCNSSSG DKIVPEEVHS SDDEEIFHSL CNSRSSSNRL SNVSAGSLID TSEIMPQEEL KTLTCSVSSS THLSTPPPPP PPPPPPSPTF PTQSPCRPTV
401: SSVKMKSKVL SHASLQIESS TRNSDSSLEN DLLQSPPNQA KPAGGIPPPP CPPPFASGST SLSKGPPPPL SLPFQQLALG KDGSPLPKLK PLHWDKVRAA
501: PDRSTVWDKL RPSSFEFDEE MIESLFGYNL HNSMKIDEGK SKTPSPSKHV LEPKRLQNIS ILSKALGVTV EQVSEALIKG NGLFLPQLEA LAKMVPTKEE
601: EDKLSSYKGD INELGSAEKF VMAMLKVPFA FLRIEAMLYR ETFDDEVNLL KKSFSMLEEA CKELRSSRLF LKLLEAVLKT GNRMNIGTIR GGARAFKLDA
701: LLKLSDVKGT DGKTTLLHFV VQEIIRSEGL KVSQSIMGKI DGRRKIKTIA DREEDYKRMG LDLVSGLGTE LFNVKKTATM DLDVIATSVS DLSEEMNKIK
801: ALVTNDLSPF ENNGNFVHSM TTFLNYAERN LKELQEDENR VLLRVKEVTE YFHGNVSKDE SNPLRIFVIV RDFLNMLDHV CKELRSSKTP NSLNPLAPFR

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.