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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030780_P001 Maize cytosol 60.98 42.13
PGSC0003DMT400020452 Potato cytosol 51.22 38.18
PGSC0003DMT400063143 Potato cytosol 81.3 31.85
PGSC0003DMT400029052 Potato cytosol 57.72 25.72
GSMUA_Achr7P26410_001 Banana endoplasmic reticulum, golgi 61.79 15.64
PGSC0003DMT400079306 Potato cytosol 51.22 15.63
TraesCS5D01G089100.1 Wheat cytosol 38.21 15.36
AT5G07780.1 Thale cress plastid 56.1 14.87
KRH03521 Soybean plastid 74.8 13.59
CDY40774 Canola cytosol 65.85 8.7
AT5G07770.3 Thale cress plastid 51.22 8.64
AT5G07650.1 Thale cress cytosol 56.1 8.47
AT5G07760.2 Thale cress cytosol, plastid 55.28 7.84
KRH56878 Soybean cytosol 74.8 7.62
GSMUA_Achr3P30260_001 Banana mitochondrion, plasma membrane 60.98 6.93
KRH54596 Soybean extracellular 71.54 6.84
VIT_17s0000g06640.t01 Wine grape cytosol, mitochondrion, plasma membrane, plastid 73.17 6.77
PGSC0003DMT400067386 Potato cytosol 18.7 6.63
CDY14029 Canola cytosol 65.85 6.58
CDX99025 Canola cytosol 60.16 6.35
CDX69994 Canola plastid 57.72 5.98
GSMUA_Achr6P16780_001 Banana cytosol 56.91 5.97
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 57.72 5.74
PGSC0003DMT400036575 Potato mitochondrion 13.01 5.59
CDX81069 Canola nucleus 64.23 5.44
Bra005952.1-P Field mustard nucleus 65.04 5.41
CDX78309 Canola nucleus 65.04 5.34
CDX69993 Canola cytosol 49.59 5.03
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 65.85 4.98
CDX99026 Canola cytosol 51.22 4.96
AT5G07740.2 Thale cress nucleus 66.67 4.87
GSMUA_Achr4P32680_001 Banana cytosol, mitochondrion 65.04 4.58
Zm00001d006758_P003 Maize cytosol 58.54 4.44
Os07t0596300-02 Rice plastid 58.54 4.43
OQU90190 Sorghum cytosol 58.54 4.38
Zm00001d022040_P002 Maize cytosol, mitochondrion, nucleus, plasma membrane 60.16 4.36
PGSC0003DMT400056393 Potato cytosol 16.26 4.17
HORVU5Hr1G020180.51 Barley mitochondrion 60.98 3.84
KXG23793 Sorghum cytosol 62.6 3.82
Zm00001d041515_P003 Maize mitochondrion 62.6 3.6
PGSC0003DMT400031544 Potato cytosol 11.38 3.08
Zm00001d030781_P001 Maize cytosol 2.44 2.8
PGSC0003DMT400013717 Potato plastid 16.26 2.32
PGSC0003DMT400055250 Potato vacuole 15.45 2.14
PGSC0003DMT400058304 Potato plasma membrane 13.82 2.12
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 13.01 2.12
PGSC0003DMT400049488 Potato golgi, plasma membrane, vacuole 14.63 2.07
PGSC0003DMT400036332 Potato plasma membrane 15.45 2.06
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 15.45 2.01
PGSC0003DMT400038519 Potato endoplasmic reticulum 13.82 1.93
PGSC0003DMT400063186 Potato plastid 11.38 1.85
PGSC0003DMT400079305 Potato cytosol, mitochondrion, plastid 11.38 1.79
PGSC0003DMT400063542 Potato extracellular, golgi, plasma membrane 11.38 1.56
PGSC0003DMT400039073 Potato cytosol 3.25 1.48
Os04t0245000-00 Rice plasma membrane 4.07 0.39
KRH03523 Soybean cytosol 0.81 0.14
KRH63288 Soybean cytosol 0.81 0.11
PGSC0003DMT400083315 Potato cytosol 0.0 0.0
TraesCS6A01G357300.1 Wheat endoplasmic reticulum, golgi 0.0 0.0
CDY02798 Canola cytosol 0.0 0.0
Bra020386.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400083163EnsemblPlantsGene:PGSC0003DMG400033086Gene3D:1.20.58.2220InterPro:FH2_ForminInterPro:IPR015425ncoils:Coil
PANTHER:PTHR23213PANTHER:PTHR23213:SF218PFAM:PF02181PFscan:PS51444PGSC:PGSC0003DMG400033086SUPFAM:SSF101447
UniParc:UPI00029636A4UniProt:M1D6M3MapMan:20.2.2.6.2:::
Description
Formin 20 [Source:PGSC_GENE;Acc:PGSC0003DMG400033086]
Coordinates
chr6:+:51534049..51537372
Molecular Weight (calculated)
13820.5 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.646
Length
123 amino acids
Sequence
(BLAST)
001: MQAIIKGLEK VKKELESSAN DGPVSEIFCK TLKEFIGASE AEVGSLRDLY SVAGRNADAL ALYFNEDPAK CPFEQVTATL LNFVRLFRKA HEENLKQAEQ
101: DKKKVQKEAE MENAEKKQLK KEG
Best Arabidopsis Sequence Match ( AT5G07740.1 )
(BLAST)
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
Arabidopsis Description
actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.