Factsheet for TraesCS6A01G357300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	54.05	50.7
TraesCS2A01G388700.1	Wheat	cytosol	45.95	31.55
TraesCS7A01G148100.1	Wheat	mitochondrion	51.65	31.33
KRH03523	Soybean	cytosol	57.96	27.14
KRH63288	Soybean	cytosol	58.86	20.72
KRH56878	Soybean	cytosol	57.06	15.74
KRH54596	Soybean	extracellular	59.76	15.46
TraesCS1A01G075600.1	Wheat	cytosol	61.86	14.84
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	58.86	14.75
TraesCS4A01G061100.1	Wheat	mitochondrion	36.34	13.43
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	7.81	3.06
TraesCS5A01G304700.1	Wheat	golgi	6.91	2.92
TraesCS1A01G327400.1	Wheat	plasma membrane	6.01	2.49
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	6.01	2.25
TraesCS2A01G193700.1	Wheat	golgi	4.8	2.04
TraesCS3A01G397900.1	Wheat	plasma membrane	5.71	2.0
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	4.8	1.76
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	5.11	1.64
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	4.2	1.48
TraesCS6A01G312000.2	Wheat	plastid	3.6	1.32
KRH03521	Soybean	plastid	2.4	1.18
TraesCS1A01G011800.1	Wheat	extracellular	1.5	0.94
AT5G07780.1	Thale cress	plastid	1.2	0.86
AT5G07760.2	Thale cress	cytosol, plastid	1.5	0.58
TraesCS2A01G183000.1	Wheat	cytosol	0.3	0.25
TraesCS5A01G075500.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G388800.1	Wheat	cytosol	0.0	0.0
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	0.0	0.0
PGSC0003DMT400063143	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G357300.1	EnsemblPlantsGene:TraesCS6A01G357300	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:IPR014020	InterPro:IPR029021
InterPro:IPR029023	InterPro:Prot-tyrosine_phosphatase-like	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271
PFAM:PF10409	PFscan:PS51181	PFscan:PS51182	SEG:seg	SMART:SM01326	SUPFAM:SSF49562
SUPFAM:SSF52799	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:587796075..587799913

Molecular Weight (calculated)

38760.7 Da

IEP (calculated)

4.874

GRAVY (calculated)

-0.154

Length

333 amino acids

Sequence
(BLAST)

001: MALFRKFFFK KPPDGVLLIT DNIYVFDHCF SLNTPEEDQF EAHTRGIAAH LLEDFHDHSF MVTNFGTRAE ESRLYHILSE YGMTVLDYPG HYEGCPLLTI
101: EMVHCILKSS ESWLSLGQHN LLIMHCEQGC WPILAFMLAA LLLYLGQYSD EQKTLDMLYK QSSSEFLEMF SPLNPMPSQI RYLRYISMRN VMPEWPPADR
201: ALTLDCLTLR MLPDFQSQGG FCPIFRIYGP DPLMPHDQTP KVLFSTPKTS NLVRFNSQAD ERVNINLQCH VQGDVVIECS NLYDDLDREE MVFRVMFNTA
301: FIRSNILMLS RDEIDMLWNA KDQFPKDFRA ESL

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.