Factsheet for TraesCS1A01G011800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G059400.1	Wheat	plastid	83.11	78.69
TraesCS1D01G010200.1	Wheat	plastid	82.93	77.82
HORVU1Hr1G002300.8	Barley	plastid	83.68	61.6
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	84.8	53.87
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	66.6	42.77
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	64.17	41.76
PGSC0003DMT400056393	Potato	cytosol	32.83	36.46
Bra029655.1-P	Field mustard	cytosol	20.64	36.3
Bra012246.1-P	Field mustard	cytosol	13.13	35.71
VIT_00s0227g00200.t01	Wine grape	cytosol	9.76	33.99
Bra001256.1-P	Field mustard	plastid	22.89	32.02
AT3G25493.1	Thale cress	vacuole	8.07	26.88
KRH47952	Soybean	cytosol	36.77	25.26
TraesCS5A01G304700.1	Wheat	golgi	34.33	23.25
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	31.89	22.52
CDX79799	Canola	mitochondrion, plastid, vacuole	33.21	22.29
Solyc08g014430.2.1	Tomato	nucleus	31.52	22.19
PGSC0003DMT400013717	Potato	plastid	35.83	22.18
VIT_05s0094g00920.t01	Wine grape	nucleus	37.34	21.4
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	36.4	21.34
Solyc12g019480.1.1	Tomato	nucleus	35.46	21.28
TraesCS2A01G193700.1	Wheat	golgi	31.14	21.15
KRH71295	Soybean	vacuole	34.71	21.02
CDY44259	Canola	plasma membrane, vacuole	33.21	21.0
TraesCS1A01G327400.1	Wheat	plasma membrane	31.33	20.77
TraesCS3A01G397900.1	Wheat	plasma membrane	36.96	20.76
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	32.65	20.74
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	34.52	20.67
CDX83457	Canola	golgi, plasma membrane, vacuole	32.65	20.64
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	27.95	20.61
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	33.02	20.54
KRH50174	Soybean	vacuole	34.52	20.54
Solyc06g082910.2.1	Tomato	extracellular	36.02	20.51
CDY17909	Canola	golgi, vacuole	32.46	20.4
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	35.83	20.23
Zm00001d035757_P003	Maize	plasma membrane	62.85	19.9
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	33.21	19.8
AT5G48360.1	Thale cress	extracellular, vacuole	28.89	19.69
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	32.83	19.55
CDX74041	Canola	golgi, plasma membrane, plastid	25.52	19.07
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	37.9	18.72
KRH40232	Soybean	endoplasmic reticulum, extracellular	36.4	18.71
KRH00989	Soybean	extracellular, golgi, vacuole	36.4	18.67
CDY07990	Canola	golgi, plasma membrane, plastid	25.14	18.56
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	36.59	18.55
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	36.77	18.51
CDX85333	Canola	plasma membrane	28.52	18.47
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.95	18.46
CDY35941	Canola	plastid	25.89	18.42
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	37.15	18.4
CDX86310	Canola	endoplasmic reticulum, plasma membrane	27.77	18.34
TraesCS5A01G075500.1	Wheat	cytosol	10.51	18.3
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	37.15	18.15
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	30.21	17.73
CDY28040	Canola	plastid	25.33	17.53
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	27.58	17.29
AT3G07540.1	Thale cress	plasma membrane	26.45	16.77
TraesCS2A01G388800.1	Wheat	cytosol	12.01	16.75
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.89	16.28
TraesCS2A01G183000.1	Wheat	cytosol	12.01	15.69
TraesCS6A01G312000.2	Wheat	plastid	26.64	15.66
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	27.77	14.26
TraesCS1A01G075600.1	Wheat	cytosol	18.57	7.13
TraesCS4A01G061100.1	Wheat	mitochondrion	7.32	4.33
TraesCS2A01G182900.1	Wheat	cytosol, golgi, nucleus	1.31	1.97
TraesCS6A01G357300.1	Wheat	endoplasmic reticulum, golgi	0.94	1.5
TraesCS2A01G388700.1	Wheat	cytosol	1.31	1.44
TraesCS7A01G148100.1	Wheat	mitochondrion	0.94	0.91

Protein Annotations

EnsemblPlants:TraesCS1A01G011800.1	EnsemblPlantsGene:TraesCS1A01G011800	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF250	PFAM:PF02181	PFscan:PS51444	SEG:seg	SignalP:SignalP-noTM
SMART:SM00498	SUPFAM:SSF101447	MapMan:20.2.2.6.1	:	:	:

Description

No Description!

Coordinates

chr1A:+:6788571..6793320

Molecular Weight (calculated)

55064.3 Da

IEP (calculated)

7.469

GRAVY (calculated)

-0.182

Length

533 amino acids

Sequence
(BLAST)

001: MPPPTPPLLL FLTLLPLAAA HAHTTRRLLQ TQPTISPAPP PPPHRHHHHT PPXXXXXXXX XXXXXXXXXX XXXXRGRAPN PSPPKRRPPP PPPQNQAWNP
101: FVPVPPTQAA FPSDDDGDSS STIAAAMHKS RPLHSDKLKP GSLHMKDEMI QLYLNNSAAA AASAAREVCL LGAPRCHGIG TVLGALGFSE EQVRDALLEG
201: NAHGLGVEAL RMLAQLVLTN EEELKLRYFK DDPPAKLCAV DAFLKTILDV PFAFKRVDAM LYVSNFYLEV NQLRMSYATL EAACEELRSS RLFHKVLGAV
301: LNFGNMMSIN TGSPSSHALE PNTLLKIVDV KGADGKAALL QFVVQEIMKP EGHSNLNPAC KTDASTSPPC DVDCRKHGLQ VVSKLAAELT STKKAASVDM
401: TGLSRSVSEL GVGLGKVHDV LRLNGMAASA ESARRFHNAM SAFLRQAEEE IVRLQGQESV CLSSVREVAE YFHGGDEVGD GEARLFRVFA GVREFVAMLD
501: RICREAGEVQ GDRVGSTPVS WVAAGAPPMG TTP

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.