Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G059400.1 | Wheat | plastid | 62.46 | 93.07 |
| TraesCS1D01G010200.1 | Wheat | plastid | 61.86 | 91.37 |
| HORVU1Hr1G002300.8 | Barley | plastid | 77.35 | 89.64 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 53.87 | 84.8 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 65.55 | 66.27 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 61.98 | 63.49 |
| Bra029655.1-P | Field mustard | cytosol | 13.11 | 36.3 |
| PGSC0003DMT400056393 | Potato | cytosol | 20.74 | 36.25 |
| Bra012246.1-P | Field mustard | cytosol | 8.1 | 34.69 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 6.2 | 33.99 |
| Bra001256.1-P | Field mustard | plastid | 14.54 | 32.02 |
| Zm00001d035757_P003 | Maize | plasma membrane | 61.02 | 30.42 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 27.41 | 28.97 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 26.94 | 28.72 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 25.74 | 28.61 |
| Solyc08g014430.2.1 | Tomato | nucleus | 25.63 | 28.4 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 24.31 | 28.22 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 28.13 | 28.13 |
| Bra004786.1-P | Field mustard | mitochondrion, plasma membrane, plastid | 28.72 | 28.12 |
| KRH71295 | Soybean | vacuole | 29.44 | 28.07 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 30.99 | 27.96 |
| KRH50174 | Soybean | vacuole | 29.56 | 27.68 |
| PGSC0003DMT400013717 | Potato | plastid | 28.37 | 27.64 |
| CDY17909 | Canola | golgi, vacuole | 27.77 | 27.48 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 27.53 | 27.4 |
| CDY44259 | Canola | plasma membrane, vacuole | 27.29 | 27.16 |
| Solyc12g019480.1.1 | Tomato | nucleus | 28.49 | 26.91 |
| AT3G25493.1 | Thale cress | vacuole | 5.13 | 26.88 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 29.08 | 26.84 |
| KRH47952 | Soybean | cytosol | 24.55 | 26.55 |
| Solyc06g082910.2.1 | Tomato | extracellular | 29.2 | 26.18 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.89 | 26.17 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 24.31 | 26.05 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 24.2 | 25.96 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 27.53 | 25.87 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 29.08 | 25.85 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 27.53 | 25.81 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 21.93 | 25.81 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 29.2 | 25.68 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 21.81 | 25.35 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 30.63 | 24.74 |
| CDY35941 | Canola | plastid | 22.05 | 24.7 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 23.72 | 24.66 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 23.6 | 24.54 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 30.15 | 24.4 |
| CDX85333 | Canola | plasma membrane | 23.84 | 24.3 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 31.23 | 24.28 |
| CDY28040 | Canola | plastid | 22.05 | 24.03 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 23.84 | 23.98 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.92 | 23.7 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.68 | 23.69 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.15 | 23.51 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.15 | 23.19 |
| AT3G07540.1 | Thale cress | plasma membrane | 22.88 | 22.83 |
| TraesCS2B01G344200.1 | Wheat | golgi | 22.65 | 22.7 |
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 20.38 | 20.26 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 22.05 | 19.66 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 20.74 | 19.31 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 19.9 | 15.94 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 7.39 | 15.2 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 12.51 | 11.27 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 14.78 | 8.84 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 12.16 | 7.63 |
| TraesCS4B01G236500.1 | Wheat | mitochondrion | 6.91 | 6.44 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 2.5 | 5.92 |
| TraesCS7B01G051900.1 | Wheat | mitochondrion | 3.22 | 4.47 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G414300.1 | EnsemblPlantsGene:TraesCS1B01G414300 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF250 | PFAM:PF02181 | PFscan:PS51444 | PRINTS:PR01217 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : |
Description
No Description!
Coordinates
chr1B:-:639415175..639419046
Molecular Weight (calculated)
88107.6 Da
IEP (calculated)
8.347
GRAVY (calculated)
-0.360
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPTPPLLL FLLILLSLAA AHAHPTRRLL QNQPTTIPAP PPPHRHHRHT PPVSGPPSPP QPAPQPLPPP PPRARHHRTP PASASXXXXX XXXPASAPPP
101: NSNPNPAPSP PTPRFSSTST TPVSEYPFTN YPFFPSFSPP PPPPSTADQQ AQPSADGDAS RTFPANISTL VAPNAGSSSN QGQGGNSRGI PVLQALLLAF
201: LSLCLLLLSA LLSLHLFRRL RRHPSGHRRA ANGAASSTTT TARRDAELDE EEDGDEEGRR LKPPPMPTSS SNPSTEFLYL GTLATPPPGT APPPSQPRPG
301: SPELRPLPPL PRVGPPSGEF GSRSSASDPS TVPRVGPPSG EFGSRSSASD PSTVPRAAAG DASSSSLSPS SPSASSPTLG SSPVHIRPPS IPQPRGRAPK
401: RRPPPPPPPA QSWNPFVPVP PAQAAPPSDD DGDSSSTIAA AMHKSRPLHS DKLNPGSLHM KDEMIQLYLN NSAAAAASAA REVCLLGAPR CHGIGTVLGA
501: LGFSEEQVRD ALLEGNAHGL GLEALRMLAR LVLTNEEELK LRYYKDDPPA KLCAVDAFLK TILDVPFAFK RVDAMLYVSS FYLEVNQLRM SYATLEAACE
601: ELRSSRLFHK VLGAVLNFGN MMSINTGSPN SHALEPNTVL KIVDVKGADG KAALLQFVVQ EIMKPEGHNN LNPACKTDAY DVDCRKHGLQ VVSKLAAELT
701: STKKAASVDM TGLSRSVSEL GVGLGKVHDV LRLNGMAASA ESARRFHNAM SAFLRQAEEE IVRLQGQESV CLSSVREMAE YFHGGDEVGD GEARLFRVFA
801: GVREFVAMLD RICREAGEVQ GDRVGSTPVS WVAPMGTTP
101: NSNPNPAPSP PTPRFSSTST TPVSEYPFTN YPFFPSFSPP PPPPSTADQQ AQPSADGDAS RTFPANISTL VAPNAGSSSN QGQGGNSRGI PVLQALLLAF
201: LSLCLLLLSA LLSLHLFRRL RRHPSGHRRA ANGAASSTTT TARRDAELDE EEDGDEEGRR LKPPPMPTSS SNPSTEFLYL GTLATPPPGT APPPSQPRPG
301: SPELRPLPPL PRVGPPSGEF GSRSSASDPS TVPRVGPPSG EFGSRSSASD PSTVPRAAAG DASSSSLSPS SPSASSPTLG SSPVHIRPPS IPQPRGRAPK
401: RRPPPPPPPA QSWNPFVPVP PAQAAPPSDD DGDSSSTIAA AMHKSRPLHS DKLNPGSLHM KDEMIQLYLN NSAAAAASAA REVCLLGAPR CHGIGTVLGA
501: LGFSEEQVRD ALLEGNAHGL GLEALRMLAR LVLTNEEELK LRYYKDDPPA KLCAVDAFLK TILDVPFAFK RVDAMLYVSS FYLEVNQLRM SYATLEAACE
601: ELRSSRLFHK VLGAVLNFGN MMSINTGSPN SHALEPNTVL KIVDVKGADG KAALLQFVVQ EIMKPEGHNN LNPACKTDAY DVDCRKHGLQ VVSKLAAELT
701: STKKAASVDM TGLSRSVSEL GVGLGKVHDV LRLNGMAASA ESARRFHNAM SAFLRQAEEE IVRLQGQESV CLSSVREMAE YFHGGDEVGD GEARLFRVFA
801: GVREFVAMLD RICREAGEVQ GDRVGSTPVS WVAPMGTTP
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.