Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 89.46 | 89.46 |
| TraesCS4D01G237900.1 | Wheat | plastid | 89.46 | 88.96 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 16.09 | 40.85 |
| CDX99029 | Canola | cytosol | 0.44 | 25.0 |
| EER87977 | Sorghum | cytosol | 14.21 | 23.84 |
| TraesCS7B01G051900.1 | Wheat | mitochondrion | 15.21 | 22.68 |
| Zm00001d045102_P001 | Maize | cytosol | 14.54 | 20.25 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 20.42 | 19.74 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 21.31 | 13.69 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 18.09 | 12.2 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 5.33 | 11.76 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 8.77 | 10.04 |
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 9.32 | 9.95 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 9.43 | 9.43 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 8.99 | 9.07 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 7.88 | 9.07 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 8.21 | 8.87 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 8.21 | 7.86 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 8.32 | 7.86 |
| TraesCS2B01G344200.1 | Wheat | golgi | 7.1 | 7.65 |
| TraesCS1B01G059400.1 | Wheat | plastid | 4.66 | 7.46 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 6.44 | 6.91 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 7.99 | 6.87 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G236500.1 | EnsemblPlantsGene:TraesCS4B01G236500 | Gene3D:2.60.40.1110 | Gene3D:3.90.190.10 | InterPro:IPR014020 | InterPro:IPR029021 |
| InterPro:Prot-tyrosine_phosphatase-like | InterPro:Tensin_C2-dom | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF190 | PFAM:PF10409 | PFscan:PS51182 |
| SEG:seg | SMART:SM01326 | SUPFAM:SSF49562 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4B:-:494586049..494589061
Molecular Weight (calculated)
97548.4 Da
IEP (calculated)
7.937
GRAVY (calculated)
-0.554
Length
901 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLRKLFAR KAMDGLSHVS ERVFVFNSCL SIGALDERAH KDYLTSTIIQ LKAGNPHASL MVVNFAAAPT GADAVHSLLG HGAAAVVADY PSRYGGCPSL
101: PLPKIRAFVG SCVDWLVSGH QRNILLMHCD GDGAAWPALA FAMASLLVYI EEAAPERTTL DAVYGRAPVE LLSACSALDP RPSHLRYLQY VTRLRDKGAL
201: MGMKQQPFVL DCLILRAVPD FDGSGGCRPV VRVHGEPREP SADVSSTEVL FSTPRIKQQF KNYKQAESTV IKADIGCQIQ GDVVIECIHV GNEGHEQIMF
301: SIMFSTCFLQ SNMTAFTLED IDLPWNCNRE KFKEDFKIEV FFSEVELSDT DESHDESELS SIGNADEFYD FDEILIEDSD FDQNERESHG EASRQDHYEE
401: PNTNTEHSET VSSDRASNSS AEKGEDGETG SSDSASNGSD EKGNISTEDE AEFIHEDGVD VTRETKEPRL GETSYLLEAG SSSSMAPIVP TIRDINEEMP
501: TDLQEDRNDG LIPVQEGGQR VTPQLMRKTR QKQAAIIPAV PIIRKKMRRP DTGPDDKKPA TSKTLVRVGS QKGALVAASS SSSNRTSQAR TIPSPHRQHV
601: VPSRLKQGSA AQAIRVSSNL SKEHLKRSSQ QQAGGDPEAR KHSASGTAAR PEVKQIVFTR QASSSFAPSP LGRERSQEDG ECSGNPMEKA KKPVIHSSEK
701: PRSSRVPKQE SPAVEAPRRT STLKKSMSSP AISATPAVSS PGKSRALTSL PAVKTSRPSS GLHIASPSSS PRRQKHSVTP PSSPGRSPLA GPRFSRAVPA
801: SQPDMQQGAS APTRLPRRAS FSELSRSVAT SRAADVHAVS PRASRVIQNH REGVKASGRS LSPSSPRLTT QPWPKTTAVV SMSSSKDRSG TAPARPTRLS
901: S
101: PLPKIRAFVG SCVDWLVSGH QRNILLMHCD GDGAAWPALA FAMASLLVYI EEAAPERTTL DAVYGRAPVE LLSACSALDP RPSHLRYLQY VTRLRDKGAL
201: MGMKQQPFVL DCLILRAVPD FDGSGGCRPV VRVHGEPREP SADVSSTEVL FSTPRIKQQF KNYKQAESTV IKADIGCQIQ GDVVIECIHV GNEGHEQIMF
301: SIMFSTCFLQ SNMTAFTLED IDLPWNCNRE KFKEDFKIEV FFSEVELSDT DESHDESELS SIGNADEFYD FDEILIEDSD FDQNERESHG EASRQDHYEE
401: PNTNTEHSET VSSDRASNSS AEKGEDGETG SSDSASNGSD EKGNISTEDE AEFIHEDGVD VTRETKEPRL GETSYLLEAG SSSSMAPIVP TIRDINEEMP
501: TDLQEDRNDG LIPVQEGGQR VTPQLMRKTR QKQAAIIPAV PIIRKKMRRP DTGPDDKKPA TSKTLVRVGS QKGALVAASS SSSNRTSQAR TIPSPHRQHV
601: VPSRLKQGSA AQAIRVSSNL SKEHLKRSSQ QQAGGDPEAR KHSASGTAAR PEVKQIVFTR QASSSFAPSP LGRERSQEDG ECSGNPMEKA KKPVIHSSEK
701: PRSSRVPKQE SPAVEAPRRT STLKKSMSSP AISATPAVSS PGKSRALTSL PAVKTSRPSS GLHIASPSSS PRRQKHSVTP PSSPGRSPLA GPRFSRAVPA
801: SQPDMQQGAS APTRLPRRAS FSELSRSVAT SRAADVHAVS PRASRVIQNH REGVKASGRS LSPSSPRLTT QPWPKTTAVV SMSSSKDRSG TAPARPTRLS
901: S
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Arabidopsis Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.