Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 97.76 | 98.53 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 97.98 | 98.31 |
| HORVU4Hr1G069940.1 | Barley | plastid | 62.82 | 96.89 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 96.08 | 95.65 |
| Os03t0204100-01 | Rice | plasma membrane | 80.18 | 80.27 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 28.22 | 76.13 |
| Zm00001d048142_P001 | Maize | plasma membrane | 73.12 | 75.84 |
| Zm00001d028089_P001 | Maize | plasma membrane | 74.24 | 75.17 |
| KXG39923 | Sorghum | mitochondrion | 77.6 | 73.65 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 32.81 | 63.7 |
| CDY37849 | Canola | endoplasmic reticulum | 33.37 | 56.76 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 50.62 | 54.2 |
| CDY08720 | Canola | mitochondrion | 40.87 | 50.21 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 48.94 | 49.32 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 45.46 | 48.33 |
| PGSC0003DMT400055250 | Potato | vacuole | 46.47 | 46.84 |
| Solyc02g092470.2.1 | Tomato | nucleus | 46.47 | 46.68 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 46.7 | 46.38 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 46.47 | 46.01 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.14 | 45.93 |
| KRH04437 | Soybean | plastid, vacuole | 45.02 | 45.48 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 43.78 | 45.1 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.79 | 44.99 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.57 | 44.77 |
| KRH28364 | Soybean | vacuole | 44.79 | 44.69 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 43.67 | 44.27 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 38.3 | 43.68 |
| Bra031838.1-P | Field mustard | cytosol | 19.82 | 40.23 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 35.27 | 40.03 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 39.64 | 37.11 |
| TraesCS1B01G059400.1 | Wheat | plastid | 22.96 | 36.41 |
| TraesCS2B01G344200.1 | Wheat | golgi | 28.33 | 30.23 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 25.87 | 27.53 |
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 25.53 | 27.01 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 26.54 | 26.3 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 26.88 | 25.5 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 26.65 | 22.71 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 8.96 | 19.61 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 14.78 | 14.16 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 18.59 | 11.83 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 16.35 | 10.93 |
| TraesCS4B01G236500.1 | Wheat | mitochondrion | 9.07 | 8.99 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 1.79 | 4.51 |
| TraesCS7B01G051900.1 | Wheat | mitochondrion | 2.8 | 4.14 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G257800.1 | EnsemblPlantsGene:TraesCS4B01G257800 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 |
| SUPFAM:SSF101447 | MapMan:20.2.2.6.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:523449729..523453485
Molecular Weight (calculated)
95632.9 Da
IEP (calculated)
9.027
GRAVY (calculated)
-0.483
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAIALLLA QLVLCGCVSP AVSADAVVPR RVLHQPLFPI EWTPPPSPPP PPAPDFTSDP SPPVATPDAP PVATPDAPPG DFFPPAPPVS SDGGGGGGGG
101: TVSSPPNTVT ADVSTPPSPT AAGHGPKKAT IVAAGAAAAA GVALLGFACA FLITGRARRR CDSQKLLGPD GGPALRRTAP SATDFLYVGT VEPTTPAHQR
201: GPTSADLAGS PYRKLRNERA RRAVCRDEAT DHPSPELRPL PPLRRATTMG SSDEDAYYTP RQRSGGSGAG GGAGSGVYGE TWSEASASSP PTTTTASRRS
301: LPSMTSDFFP PVAAIAALPP PPRSRRTRTP PRTRFSTGST PDAKQAISPS PRPVQPSNPP SRPPPPPPPP PPPPPPTAPP KSNTAPRPPP PPPPPPMAST
401: NSLPPKTGEP TSRRRLLKPL PPEGPRIAMP MPITAAAAAE NNGSTSMRAE DDAAGGLPKL KPLHWDKVRA TSDRAMVWDQ LKSSSFQLDE DMIEALFMNN
501: SMPAAPPRDT GRKPAVPPFR QEERVLDPKK AQNIAILLRA LNVTREEVSD ALLDGNAECL GSELLETLVK MSPTKEEEVK LRDYSGDLEK LGTAERFLKT
601: VLDIPFAFKR VDAMLYRANF ETEINYLRKS FETLEAACED LRGSRLFLKL LEAVLRTGNR MNVGTNRGEA KAFKLDTLLK LADVKGADGK TTLLHFVVQE
701: MIRSEDAKPE KENTTATSSK DKGLKVVCGL SSELGNVKKA ASMDFDVLHG YVSKLETGLE KIKSVLQLER QCTQGQRFFT AMQGFLKEAD KEIEIVRGEE
801: KRALGRVKDI TDYFHGDAAK EEAHPLRIFM VVRDFLSMLD HVCREVGRMQ QDRTVVGSAR SFRVSTTAPL PVLSLYGQRR QNNSDDDDDS MSS
101: TVSSPPNTVT ADVSTPPSPT AAGHGPKKAT IVAAGAAAAA GVALLGFACA FLITGRARRR CDSQKLLGPD GGPALRRTAP SATDFLYVGT VEPTTPAHQR
201: GPTSADLAGS PYRKLRNERA RRAVCRDEAT DHPSPELRPL PPLRRATTMG SSDEDAYYTP RQRSGGSGAG GGAGSGVYGE TWSEASASSP PTTTTASRRS
301: LPSMTSDFFP PVAAIAALPP PPRSRRTRTP PRTRFSTGST PDAKQAISPS PRPVQPSNPP SRPPPPPPPP PPPPPPTAPP KSNTAPRPPP PPPPPPMAST
401: NSLPPKTGEP TSRRRLLKPL PPEGPRIAMP MPITAAAAAE NNGSTSMRAE DDAAGGLPKL KPLHWDKVRA TSDRAMVWDQ LKSSSFQLDE DMIEALFMNN
501: SMPAAPPRDT GRKPAVPPFR QEERVLDPKK AQNIAILLRA LNVTREEVSD ALLDGNAECL GSELLETLVK MSPTKEEEVK LRDYSGDLEK LGTAERFLKT
601: VLDIPFAFKR VDAMLYRANF ETEINYLRKS FETLEAACED LRGSRLFLKL LEAVLRTGNR MNVGTNRGEA KAFKLDTLLK LADVKGADGK TTLLHFVVQE
701: MIRSEDAKPE KENTTATSSK DKGLKVVCGL SSELGNVKKA ASMDFDVLHG YVSKLETGLE KIKSVLQLER QCTQGQRFFT AMQGFLKEAD KEIEIVRGEE
801: KRALGRVKDI TDYFHGDAAK EEAHPLRIFM VVRDFLSMLD HVCREVGRMQ QDRTVVGSAR SFRVSTTAPL PVLSLYGQRR QNNSDDDDDS MSS
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.