Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048142_P001 | Maize | plasma membrane | 85.49 | 87.57 |
| KXG39923 | Sorghum | mitochondrion | 91.16 | 85.44 |
| HORVU4Hr1G069940.1 | Barley | plastid | 52.72 | 80.31 |
| Os03t0204100-01 | Rice | plasma membrane | 80.27 | 79.37 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 28.46 | 75.83 |
| TraesCS4D01G257700.1 | Wheat | plasma membrane | 75.51 | 75.17 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 76.19 | 74.92 |
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 75.51 | 74.83 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 75.17 | 74.24 |
| Zm00001d013926_P001 | Maize | extracellular, plasma membrane | 59.75 | 63.11 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 32.43 | 62.17 |
| Zm00001d032545_P001 | Maize | plasma membrane | 57.94 | 59.49 |
| CDY37849 | Canola | endoplasmic reticulum | 33.11 | 55.62 |
| CDY08720 | Canola | mitochondrion | 40.59 | 49.24 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 49.09 | 48.87 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 45.58 | 47.86 |
| PGSC0003DMT400055250 | Potato | vacuole | 46.37 | 46.16 |
| Solyc02g092470.2.1 | Tomato | nucleus | 46.37 | 46.01 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 46.03 | 45.67 |
| KRH28364 | Soybean | vacuole | 46.26 | 45.59 |
| Zm00001d021985_P001 | Maize | plasma membrane | 40.7 | 45.27 |
| KRH04437 | Soybean | plastid, vacuole | 45.12 | 45.02 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 44.1 | 44.87 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 45.46 | 44.61 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 45.58 | 44.57 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 45.24 | 44.48 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.67 | 44.32 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 44.22 | 44.27 |
| Bra031838.1-P | Field mustard | cytosol | 20.52 | 41.14 |
| Zm00001d021173_P001 | Maize | plasma membrane | 35.03 | 40.55 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 41.04 | 38.07 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 41.16 | 37.97 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 36.05 | 37.77 |
| Zm00001d030781_P001 | Maize | cytosol | 3.97 | 32.71 |
| Zm00001d003406_P002 | Maize | plasma membrane | 28.91 | 30.32 |
| Zm00001d032225_P001 | Maize | golgi | 26.64 | 26.35 |
| Zm00001d017983_P001 | Maize | plasma membrane | 27.1 | 25.95 |
| Zm00001d006549_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 26.64 | 25.49 |
| Zm00001d004557_P002 | Maize | golgi, plasma membrane, vacuole | 26.19 | 24.42 |
| Zm00001d024947_P005 | Maize | plasma membrane | 26.64 | 23.43 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 25.62 | 22.33 |
| Zm00001d030780_P001 | Maize | cytosol | 2.83 | 14.04 |
| Zm00001d035757_P003 | Maize | plasma membrane | 24.83 | 13.01 |
| Zm00001d050024_P001 | Maize | cytosol | 19.16 | 12.19 |
| Zm00001d018371_P001 | Maize | cytosol | 17.57 | 10.96 |
| Zm00001d032101_P001 | Maize | cytosol | 7.37 | 9.54 |
| Zm00001d006758_P003 | Maize | cytosol | 17.12 | 9.32 |
| Zm00001d022040_P002 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 17.23 | 8.95 |
| Zm00001d041515_P003 | Maize | mitochondrion | 18.03 | 7.43 |
| Zm00001d017027_P001 | Maize | cytosol | 1.7 | 6.28 |
| Zm00001d030782_P001 | Maize | mitochondrion | 13.95 | 6.02 |
| Zm00001d045102_P001 | Maize | cytosol | 2.72 | 3.71 |
Protein Annotations
| EnsemblPlants:Zm00001d028089_P001 | EnsemblPlants:Zm00001d028089_T001 | EnsemblPlantsGene:Zm00001d028089 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 |
| PFAM:PF02181 | PFscan:PS51444 | ProteinID:ONL94677.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 |
| SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0008438BC1 | UniProt:A0A1D6JRX3 | MapMan:20.2.2.6.1 | : |
Description
Formin-like protein 6
Coordinates
chr1:-:22608980..22613235
Molecular Weight (calculated)
95140.6 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.476
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPTTVMLLP ACTVLLLCCR LSPAAASSPG DVGGGGARRL LHQPLFPIEW TPPPSPQPDF SSDPATPDGP PGAFFPPTPP VAPAGGGGTT TTSSPTTVAS
101: NVPAGASSGS GDGGHHGGPA KGTIVAAGAA ATAAIALLAF ACAFLIALRA RRRGDSQKLL GPDRGSARHH SAPSAADFLY VGTVEPTTPG RHHGSPAADL
201: IGSPYRKLRS ERARRDEPTD NLSPELRPLP PLRRAATMGS SDDAYYTPRQ RSGGSGGGGV GGETWSEASA SSPPTTTTAS RRSLPSLTSD CFPPVTAIAA
301: PTPPPARSRR TPPRTRFSAG STPDIKQVIS PSPRSVQPSK APPPPPPPPP PPKSIMTAPK PPPPPPPPPM IPSNTLLKPA QPPSPSEPTS RRRLLKPLPP
401: EGPRIAMPMP ITATTAEDSI GSASMRKQDY VADGIVGNDE PRPKLKPLHW DKVRATSDRA MVWDQLKSSC SFQLDEGMIE ALFMNNSTPT APPRDAGRKT
501: TVPPFRQEER VLDPKKAQNI AILLRALNVT RDEVSDALLD GNTEYLGTEL LETLVKMAPT KEEELKLQDY NDDTSKLGSA ERFLKSVLDI PFAFKRVDAM
601: LYRANFESEI NYLMKSFETL EAACEDLRGS RLFLKLLEAV LRTGNRMNVG TNRGEAKAFK LDTLLKLADV KGTDGKTTLL HFVVQEIVRS EDAKSEKESA
701: MITRSSKDEQ LRKQGLKLVS GLSSELGNVK KAAMMDFDVL HGYVNKLETG LEKIKSVLQL ERQCTQGQKF FSTMQSFLKK AEAEIEKVRG EEKRALMRVK
801: DITEYFHGDT VKEEPHPLRI FMVVRDFLST LDHVCKEVGR LQQDRTVVGS ARSFRIPATS LPILNVYGQR RENDSDDDNS SF
101: NVPAGASSGS GDGGHHGGPA KGTIVAAGAA ATAAIALLAF ACAFLIALRA RRRGDSQKLL GPDRGSARHH SAPSAADFLY VGTVEPTTPG RHHGSPAADL
201: IGSPYRKLRS ERARRDEPTD NLSPELRPLP PLRRAATMGS SDDAYYTPRQ RSGGSGGGGV GGETWSEASA SSPPTTTTAS RRSLPSLTSD CFPPVTAIAA
301: PTPPPARSRR TPPRTRFSAG STPDIKQVIS PSPRSVQPSK APPPPPPPPP PPKSIMTAPK PPPPPPPPPM IPSNTLLKPA QPPSPSEPTS RRRLLKPLPP
401: EGPRIAMPMP ITATTAEDSI GSASMRKQDY VADGIVGNDE PRPKLKPLHW DKVRATSDRA MVWDQLKSSC SFQLDEGMIE ALFMNNSTPT APPRDAGRKT
501: TVPPFRQEER VLDPKKAQNI AILLRALNVT RDEVSDALLD GNTEYLGTEL LETLVKMAPT KEEELKLQDY NDDTSKLGSA ERFLKSVLDI PFAFKRVDAM
601: LYRANFESEI NYLMKSFETL EAACEDLRGS RLFLKLLEAV LRTGNRMNVG TNRGEAKAFK LDTLLKLADV KGTDGKTTLL HFVVQEIVRS EDAKSEKESA
701: MITRSSKDEQ LRKQGLKLVS GLSSELGNVK KAAMMDFDVL HGYVNKLETG LEKIKSVLQL ERQCTQGQKF FSTMQSFLKK AEAEIEKVRG EEKRALMRVK
801: DITEYFHGDT VKEEPHPLRI FMVVRDFLST LDHVCKEVGR LQQDRTVVGS ARSFRIPATS LPILNVYGQR RENDSDDDNS SF
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.