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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08720 Canola mitochondrion 80.83 99.72
CDY36494 Canola endoplasmic reticulum, vacuole 95.99 95.45
AT5G67470.1 Thale cress extracellular, plasma membrane, vacuole 85.17 84.98
GSMUA_Achr7P26240_001 Banana cytosol 26.42 71.6
VIT_07s0129g00220.t01 Wine grape endoplasmic reticulum, extracellular 61.76 62.53
GSMUA_Achr4P07090_001 Banana cytosol 30.66 59.78
Bra031838.1-P Field mustard cytosol 28.87 58.86
KRH77115 Soybean endoplasmic reticulum, golgi, vacuole 57.53 58.04
PGSC0003DMT400055250 Potato vacuole 57.3 58.01
KRH28364 Soybean vacuole 57.41 57.54
KRH04437 Soybean plastid, vacuole 56.52 57.35
Solyc02g092470.2.1 Tomato nucleus 56.74 57.26
KRH58088 Soybean endoplasmic reticulum, golgi, vacuole 56.19 56.69
Solyc03g044060.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 52.95 54.79
PGSC0003DMT400038519 Potato endoplasmic reticulum 53.73 54.71
HORVU4Hr1G069940.1 Barley plastid 35.23 54.58
Os03t0204100-01 Rice plasma membrane 47.05 47.31
Bra029655.1-P Field mustard cytosol 15.83 46.86
TraesCS4D01G257700.1 Wheat plasma membrane 46.27 46.84
TraesCS4A01G047000.1 Wheat extracellular, plasma membrane, vacuole 46.27 46.63
TraesCS4B01G257800.1 Wheat plasma membrane 45.93 46.14
HORVU4Hr1G069930.2 Barley golgi, mitochondrion, plasma membrane 46.04 46.04
Zm00001d028089_P001 Maize plasma membrane 44.48 45.24
Zm00001d048142_P001 Maize plasma membrane 42.59 44.37
Zm00001d013926_P001 Maize extracellular, plasma membrane 40.69 43.71
KXG39923 Sorghum mitochondrion 45.82 43.68
Bra012246.1-P Field mustard cytosol 9.36 42.86
Bra001256.1-P Field mustard plastid 18.17 42.78
HORVU1Hr1G077850.2 Barley mitochondrion 33.33 41.82
TraesCS1A01G327400.1 Wheat plasma membrane 37.46 41.79
KXG38231 Sorghum plastid 41.92 41.69
Zm00001d032545_P001 Maize plasma membrane 39.91 41.68
Os07t0588200-01 Rice golgi, plasma membrane, vacuole 35.79 41.47
Zm00001d021985_P001 Maize plasma membrane 36.45 41.24
EER97466 Sorghum plasma membrane 36.45 41.18
TraesCS2B01G213200.1 Wheat plasma membrane 35.79 41.0
TraesCS2A01G193700.1 Wheat golgi 35.56 40.64
Os10t0347800-00 Rice cytosol, nucleus, plastid 38.46 40.35
HORVU2Hr1G035230.1 Barley golgi, plasma membrane, plastid 35.34 40.28
TraesCS1B01G340800.1 Wheat mitochondrion 37.01 39.81
TraesCS1D01G329400.1 Wheat plastid 36.34 39.09
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 37.01 38.74
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 36.34 36.42
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 18.73 34.29
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 41.47 34.1
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 29.88 32.72
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 28.65 31.5
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 28.09 31.23
Bra029012.1-P Field mustard plasma membrane 29.54 30.85
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 28.21 30.74
Bra002969.1-P Field mustard plasma membrane 29.65 30.33
Bra039561.1-P Field mustard golgi 27.65 29.63
Bra024640.1-P Field mustard vacuole 24.08 29.03
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 25.86 28.93
Bra017889.1-P Field mustard nucleus 21.52 24.43
Bra038438.1-P Field mustard extracellular 7.13 21.12
Bra023204.1-P Field mustard cytosol 18.95 14.62
Bra007822.1-P Field mustard cytosol 17.84 14.31
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 18.06 13.1
Bra002668.1-P Field mustard cytosol 18.51 12.85
Bra020385.1-P Field mustard cytosol 18.51 11.89
Bra005952.1-P Field mustard nucleus 19.18 11.62
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 19.29 10.63
Bra020386.1-P Field mustard cytosol 4.79 9.43
Bra009307.1-P Field mustard cytosol 8.14 9.05
Protein Annotations
EnsemblPlants:Bra024447.1EnsemblPlants:Bra024447.1-PEnsemblPlantsGene:Bra024447Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213PANTHER:PTHR23213:SF261PFAM:PF02181
PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI000253EF1AUniProt:M4E6P3MapMan:20.2.2.6.1:::
Description
AT5G67470 (E=5e-312) | formin homology 2 domain-containing protein / FH2 domain-containing protein
Coordinates
chrA06:-:15802206..15805576
Molecular Weight (calculated)
98698.1 Da
IEP (calculated)
9.814
GRAVY (calculated)
-0.617
Length
897 amino acids
Sequence
(BLAST)
001: MSFLHSRFFF FLLFFSSFSV SSFSVGEVNE IHRRILHQPL FPDASPPPPP VFQSTPPPPD APDQPFFPEN PSTPDQSQLP PPPPPPPASS DANGGLPIPT
101: ATTQQAKPGK KFAIVISVGV VTLGMLSALA FFLYRHKAKH ASDTQKLVSR GGDGGSRRFQ EDPLPPTSST FLYMGTVEPS REPASESIGP VNTSPYRKLN
201: SVTRSDRYRP SPELQPLPPL AKPPQPSENS PSALSPSTSS SDEECRGTAF YTPHGSAISS DDGYYTAFPR SANSNGHSSG SIPHSKRTSP KSKFGSRSPE
301: MKHVIIPSIK QKPPPIQSPP LRGLETDPYP QNKPKFSQPP PPPNRAAFQA ITQDKSPLST RVSPRRSPPP LHTPHPPPPP PLYTPPPPPP PPPRPPPPPQ
401: IRPRDFQIPR KLSNPEATKP DDQSRKLAFK TPSPQSKAVE EAKSVSADGD TDPSKPKLKP LHWDKVRASS DRATVWDQLK SSSFQVNEDR MEHLFGCSSA
501: SSAPKEPVRR SVMPPAENEN RVLDPKKSQN IAILLRALNV TREEVSEALL DGNPESLGAE LLETLVKMAP TKEEEIKLRE YSGDVSKLGT AERFLKTILD
601: IPFAFKRVEA MLYRANFDAE VKYLRNSFQT LEEASLELKA SRLFLKLLEA VLMTGNRMNV GTNRGEAKAF KLDTLLKLVD IKGVDGKTTL LHFVVQEITK
701: SEATTTTIDE TILHENKDGF RKQGLQVVAG LSRDLANVKK SAGMDSDVLS GYVTKLETGL EKLRAFVKTE TTTTPGKFFD SMKTFLKDAE EEIRKIKGGE
801: RKALSMVKEV TEYFHGDAAK EEAHPLRIFM VVRDFLGVLD NVCKEVKTMQ EMSSAMGSAS ARSFRISATA SLPVLHRYKS RQEDTSSDNE HSSNSST
Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.