Factsheet for GSMUA_Achr4P07090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26240_001	Banana	cytosol	59.35	82.48
HORVU4Hr1G069940.1	Barley	plastid	61.52	48.88
CDY37849	Canola	endoplasmic reticulum	54.35	47.62
GSMUA_Achr11P...	Banana	mitochondrion, plastid	44.35	47.44
GSMUA_Achr5P25760_001	Banana	mitochondrion	44.35	46.47
GSMUA_Achr6P18370_001	Banana	nucleus	56.3	46.0
CDY08720	Canola	mitochondrion	60.0	37.96
GSMUA_Achr7P18740_001	Banana	nucleus	40.22	36.27
GSMUA_Achr6P04430_001	Banana	cytosol	33.26	36.0
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	38.26	35.41
HORVU1Hr1G077850.2	Barley	mitochondrion	53.04	34.13
Os03t0204100-01	Rice	plasma membrane	64.78	33.41
CDY43578	Canola	endoplasmic reticulum, extracellular	60.87	33.33
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	64.13	33.15
TraesCS4D01G257700.1	Wheat	plasma membrane	63.7	33.07
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	63.26	32.84
TraesCS4B01G257800.1	Wheat	plasma membrane	63.7	32.81
HORVU4Hr1G069930.2	Barley	golgi, mitochondrion, plasma membrane	63.91	32.78
Bra031838.1-P	Field mustard	cytosol	31.3	32.73
Zm00001d013926_P001	Maize	extracellular, plasma membrane	59.35	32.69
Os10t0347800-00	Rice	cytosol, nucleus, plastid	60.65	32.63
Zm00001d028089_P001	Maize	plasma membrane	62.17	32.43
KRH04437	Soybean	plastid, vacuole	60.43	31.45
KXG39923	Sorghum	mitochondrion	64.13	31.35
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	58.48	31.03
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	59.78	30.93
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	60.0	30.7
PGSC0003DMT400055250	Potato	vacuole	59.13	30.7
Zm00001d048142_P001	Maize	plasma membrane	57.39	30.66
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.78	30.66
Solyc02g092470.2.1	Tomato	nucleus	59.13	30.6
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	59.13	30.6
Os07t0588200-01	Rice	golgi, plasma membrane, vacuole	51.3	30.49
CDY36494	Canola	endoplasmic reticulum, vacuole	59.78	30.49
TraesCS1A01G327400.1	Wheat	plasma membrane	53.26	30.47
PGSC0003DMT400038519	Potato	endoplasmic reticulum	58.26	30.42
KRH28364	Soybean	vacuole	59.13	30.39
EER97466	Sorghum	plasma membrane	52.17	30.23
Zm00001d032545_P001	Maize	plasma membrane	56.3	30.15
Zm00001d021985_P001	Maize	plasma membrane	51.74	30.01
KXG38231	Sorghum	plastid	58.7	29.93
TraesCS2B01G213200.1	Wheat	plasma membrane	50.87	29.89
HORVU2Hr1G035230.1	Barley	golgi, plasma membrane, plastid	50.65	29.61
TraesCS2A01G193700.1	Wheat	golgi	50.43	29.55
GSMUA_Achr10P...	Banana	plastid	51.52	29.51
TraesCS1B01G340800.1	Wheat	mitochondrion	53.26	29.38
TraesCS1D01G329400.1	Wheat	plastid	52.61	29.02
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	39.57	28.04
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	41.96	26.69
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	45.22	24.79
GSMUA_Achr8P22610_001	Banana	plasma membrane	37.61	22.82
GSMUA_Achr2P14090_001	Banana	mitochondrion	32.83	22.71
GSMUA_Achr7P23740_001	Banana	plastid	57.61	22.1
GSMUA_Achr1P25960_001	Banana	mitochondrion	10.0	21.9
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	20.22	19.14
GSMUA_Achr5P13600_001	Banana	extracellular	12.17	18.86
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	18.91	12.72
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	20.65	8.78
GSMUA_Achr3P04690_001	Banana	cytosol	20.43	8.25
GSMUA_Achr6P16780_001	Banana	cytosol	20.0	7.84
GSMUA_Achr1P25970_001	Banana	cytosol	9.13	5.63
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	19.35	5.1
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	8.91	4.4
GSMUA_Achr5P13590_001	Banana	cytosol	5.87	2.93
GSMUA_Achr3P13420_001	Banana	cytosol	0.65	0.48
GSMUA_Achr1P25980_001	Banana	plasma membrane	0.22	0.35

Protein Annotations

EnsemblPlants:GSMUA_Achr4P07090_001	EnsemblPlants:GSMUA_Achr4T07090_001	EnsemblPlantsGene:GSMUA_Achr4G07090_001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI000296C3EE	UniProt:M0SLS6	MapMan:20.2.2.6.1	:

Description

Formin-like protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G07090_001]

Coordinates

chr4:-:5271404..5276009

Molecular Weight (calculated)

52056.0 Da

IEP (calculated)

9.221

GRAVY (calculated)

-0.318

Length

460 amino acids

Sequence
(BLAST)

001: MVWDQMKSSS FQMNEDIIET LFVNITSSSL PKATSRRQRV LPLDEEKRVL DPKKSQNIAI LLRALNVTRE EVHDALLDDS KEKRNGLSAT GNPECLGAEL
101: LETLIKMAPT KEEELRLHDY MGDISKLGSA ERFLKAVLDV PFAFKRVDAM LYRANFETEV KYLIKSFGTL EAACEDLTSS RLFLKLLEAV LRTGNRMNVG
201: TNLGQAKAFK LDTLLKLTDV KGTDGKTTLL HFVVQEIIRS EGTGLKVVAG LSNELGNIRK AAGMDSDVLS SYVLRLDVGL QKIKSVLQLE KSCTQGMKFF
301: DTMKVFLEEA ERKIDHVKAE EKRVMNIVKE TTEYFHGDAA KEEAHPLRIF MVVRDFLSVL DNVCKEVGRL QERTSMGSAR SFRISVNASL PVLQRYEQRR
401: VVQSDDDDDS SSSHFPFKYK MVGVLPLGTV HERSVDRFRS RRASRPHLQI TRSLYPRSLA

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.