Factsheet for GSMUA_Achr1P25980_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P13420_001	Banana	cytosol	73.85	33.71
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	58.3	17.72
Zm00001d032101_P001	Maize	cytosol	41.34	17.18
GSMUA_Achr3P04690_001	Banana	cytosol	65.02	16.15
OQU80260	Sorghum	cytosol	62.19	15.52
VIT_11s0016g00160.t01	Wine grape	cytosol	61.84	15.16
KRH72294	Soybean	cytosol	63.6	14.89
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	56.54	14.79
KRH03063	Soybean	cytosol	61.48	14.4
GSMUA_Achr5P13590_001	Banana	cytosol	45.58	14.02
AT5G58160.1	Thale cress	cytosol	60.42	13.51
CDY32721	Canola	cytosol	59.36	13.5
CDY02799	Canola	cytosol	58.66	13.27
Bra002668.1-P	Field mustard	cytosol	59.01	12.93
CDY62689	Canola	cytosol	59.01	12.93
Solyc12g010110.1.1	Tomato	cytosol	59.01	12.86
CDY43877	Canola	cytosol	59.36	12.75
GSMUA_Achr6P16780_001	Banana	cytosol	52.65	12.7
TraesCS1A01G075600.1	Wheat	cytosol	61.48	12.54
TraesCS1D01G077900.1	Wheat	cytosol	61.84	12.49
TraesCS1B01G094200.1	Wheat	cytosol	61.13	12.33
Bra020385.1-P	Field mustard	cytosol	59.36	12.03
TraesCS6B01G389300.1	Wheat	cytosol	51.59	10.93
TraesCS6D01G339300.1	Wheat	cytosol	51.24	10.86
Os02t0794900-00	Rice	cytosol	51.94	10.66
KXG31267	Sorghum	cytosol	52.65	9.99
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	53.0	8.59
GSMUA_Achr2P14090_001	Banana	mitochondrion	7.42	3.16
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	5.3	3.09
GSMUA_Achr11P...	Banana	mitochondrion, plastid	4.24	2.79
GSMUA_Achr10P...	Banana	plastid	7.77	2.74
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	6.71	2.63
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	7.42	2.5
HORVU5Hr1G123610.1	Barley	cytosol, plastid	0.35	2.5
PGSC0003DMT400020452	Potato	cytosol	1.41	2.42
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	4.95	2.16
GSMUA_Achr1P25960_001	Banana	mitochondrion	1.41	1.9
GSMUA_Achr8P22610_001	Banana	plasma membrane	4.95	1.85
GSMUA_Achr7P18740_001	Banana	nucleus	3.18	1.76
GSMUA_Achr5P13600_001	Banana	extracellular	1.77	1.68
GSMUA_Achr5P25760_001	Banana	mitochondrion	2.47	1.59
GSMUA_Achr1P25970_001	Banana	cytosol	3.89	1.47
GSMUA_Achr7P23740_001	Banana	plastid	6.01	1.42
PGSC0003DMT400029052	Potato	cytosol	1.06	1.09
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	2.47	1.02
Solyc07g005480.2.1	Tomato	vacuole	2.47	0.79
GSMUA_Achr6P04430_001	Banana	cytosol	0.71	0.47
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	0.71	0.4
GSMUA_Achr6P18370_001	Banana	nucleus	0.71	0.36
Os08t0280200-02	Rice	nucleus	1.06	0.34
GSMUA_Achr7P26240_001	Banana	cytosol	0.35	0.3
GSMUA_Achr4P07090_001	Banana	cytosol	0.35	0.22

Protein Annotations

EnsemblPlants:GSMUA_Achr1P25980_001	EnsemblPlants:GSMUA_Achr1T25980_001	EnsemblPlantsGene:GSMUA_Achr1G25980_001	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	InterPro:Prot-tyrosine_phosphatase-like
InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	PFscan:PS51181	PFscan:PS51182
TMHMM:TMhelix	UniParc:UPI0002968B3B	UniProt:M0S355	MapMan:35.1	:	:

Description

Formin-like protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25980_001]

Coordinates

chr1:-:20576384..20578001

Molecular Weight (calculated)

32872.3 Da

IEP (calculated)

8.441

GRAVY (calculated)

0.122

Length

283 amino acids

Sequence
(BLAST)

001: MALFRKFFYR KPPDGLLEIS ERVYVSLLLL NGFAVFDCCF TTDVSEQDEY KVYIGGIVAQ LRDNFPDASF MVFNFREGET QSQISSILSE HDMTVMDYPR
101: QYEGCGWPVL AFMLAALLVY RKQYAGEQRT LDMIYKQAPH ELLHFLSPLN PLPSQLRYLH YISRRNVGAQ WPPLDRALTL DCIILRFIPD FDGTGGCRPI
201: FRIYGQDPFI ASDRTPKVLF STPKKGKLVR FYKQVIFYVL SEIRCFLKCP KMFYKLLSFS VCIFSFMVYT NCYYIVMALA GIA

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.