Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029052 | Potato | cytosol | 16.29 | 68.12 |
| GSMUA_Achr1P25980_001 | Banana | plasma membrane | 15.16 | 61.84 |
| KRH72294 | Soybean | cytosol | 57.71 | 55.09 |
| KRH03063 | Soybean | cytosol | 56.07 | 53.56 |
| PGSC0003DMT400020452 | Potato | cytosol | 7.63 | 53.33 |
| CDY32721 | Canola | cytosol | 54.59 | 50.64 |
| CDY02799 | Canola | cytosol | 54.68 | 50.44 |
| AT5G58160.1 | Thale cress | cytosol | 55.11 | 50.24 |
| Bra002668.1-P | Field mustard | cytosol | 55.55 | 49.61 |
| CDY62689 | Canola | cytosol | 55.55 | 49.61 |
| Solyc12g010110.1.1 | Tomato | cytosol | 53.12 | 47.19 |
| CDY43877 | Canola | cytosol | 53.55 | 46.89 |
| OQU80260 | Sorghum | cytosol | 45.15 | 45.94 |
| Bra020385.1-P | Field mustard | cytosol | 54.77 | 45.27 |
| TraesCS1A01G075600.1 | Wheat | cytosol | 53.47 | 44.45 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 53.81 | 44.33 |
| VIT_04s0008g06530.t01 | Wine grape | cytosol, nucleus, plasma membrane | 56.33 | 44.16 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 53.21 | 43.76 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 49.13 | 42.66 |
| Solyc07g005480.2.1 | Tomato | vacuole | 32.32 | 42.19 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 47.05 | 41.55 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 44.97 | 38.88 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 44.71 | 38.62 |
| Os08t0280200-02 | Rice | nucleus | 29.81 | 38.52 |
| Zm00001d032101_P001 | Maize | cytosol | 22.7 | 38.47 |
| Os02t0794900-00 | Rice | cytosol | 45.84 | 38.36 |
| KXG31267 | Sorghum | cytosol | 48.79 | 37.76 |
| HORVU5Hr1G123610.1 | Barley | cytosol, plastid | 1.04 | 30.0 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 8.93 | 20.64 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 14.3 | 18.62 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 14.9 | 18.49 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 12.05 | 17.35 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 11.79 | 16.67 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 13.26 | 15.97 |
| VIT_17s0000g07570.t01 | Wine grape | nucleus | 11.7 | 15.9 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 11.01 | 15.51 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 1.73 | 13.07 |
Protein Annotations
| Gene3D:1.20.58.2220 | EntrezGene:100249846 | wikigene:100249846 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 |
| ProteinID:CCB62821 | ProteinID:CCB62821.1 | ncoils:Coil | UniProt:F6I7A3 | InterPro:FH2_Formin | EMBL:FN596770 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 |
| InterPro:IPR029023 | EntrezGene:LOC100249846 | wikigene:LOC100249846 | PFAM:PF02181 | PFAM:PF10409 | PFscan:PS51181 |
| PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF190 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 |
| SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF49562 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase |
| UniParc:UPI0002108EEA | ArrayExpress:VIT_11s0016g00160 | EnsemblPlantsGene:VIT_11s0016g00160 | EnsemblPlants:VIT_11s0016g00160.t01 | RefSeq:XP_002265146 | RefSeq:XP_002265146.2 |
| SEG:seg | : | : | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6I7A3]
Coordinates
chr11_random:+:108599..163080
Molecular Weight (calculated)
127892.0 Da
IEP (calculated)
6.687
GRAVY (calculated)
-0.381
Length
1154 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALLRKLFYR KPPDGLLEIC DRVHVFDCCF TTDAWEEENY KVYIRGIVGQ LRDHIPDASI LVFNFHEGEG QSQIANFLSD FDMTIMDYPR HYEGCPLLTM
0101: EVIHHFLRSS ESWLSLGPNN LLLMHCERGG WPILAFMLAA LLIYRKHYTG EQKTLEMIYK QSPCELLQCL SPLNPVPSQT RYLQYISRRN MASEWPPLDR
0201: ALTLDCVIIR LVPDFDGEGG CRPIFRIYGQ DPFLVADRTP KLLFSTPKKS KTIRHYKQEE CELVKIDINC HIQGDVVLEC INLNDDTEYE EMIFRLMFNT
0301: AFIRSNILML NRDEIDILWN AKDQFPKDFR AEVLFSDMDA AASVVTVDLS CFEEKDGLPV EAFAKVHEIF SHVDWLDPKT DAALNVLQQI TASNVVQGRV
0401: ETDSPGSVET STSLQELITE KVQGKQKPAS SEDNAEKFSS FALENKHFLS QKPSEGADVN ERKAEPQLQE RQQTAAMERE TMNSTTFSIK NDSGSSSEPS
0501: TFADMSKKKP VSRYHSSSSA TGITPLFPEY ISSDPSLDFS DAHKSVEQKG VSISPPTPLG PHQPLPIQPT LTASATKTLA SPPPPPPPPP PPPVPQQLPQ
0601: LPPHQISASK STHLTLAKQS EKYLQGRDQS SLVPPLPAPE TPVSSISFHE SSSNSTSPSP ALIVTSSTLP PPPPPPPPLK KNLSTRAVPP PPPPPPPPPP
0701: PSHSGKTTSP VPPPPPPAPA FSSKFNPALE DSSHVPAVPP PPATFSKEVS KMDAISPVSY SASGYPAPPA PCGYPAISNG RNMSRTISSR NHQTKKLKPL
0801: HWLKLTRAVS GSLWAETQKS GEASKAPEID MSELESLFSA AAPKSDHGNS SGKSNLRAPA GSKFDKVQLI EHRRAYNCEI MLSKVKVPLH ELMNSVLALE
0901: DSALDVDQVD NLIKFCPTKD EIELLKGYKG EKEKLGKCEQ FLLELMQVPR VETKLRVFSF KIQFPSLVSY LRTSLNVVNS AAEEASYSPI KNSLKLKRIM
1001: QTILQLGNAL NQGTSRGSAI GFRLDSLLKI ADTRARNKKT TLMHYLCKVL ADKLPEVLDF SKDLASLEPA SKIQLKFLAE EMQAISKGLE KVMQELSSSE
1101: NDGPISENFC KTLKKFLHFA ETEVRSLASL YSGVGRNVDA LILYFGEDPA RCPF
0101: EVIHHFLRSS ESWLSLGPNN LLLMHCERGG WPILAFMLAA LLIYRKHYTG EQKTLEMIYK QSPCELLQCL SPLNPVPSQT RYLQYISRRN MASEWPPLDR
0201: ALTLDCVIIR LVPDFDGEGG CRPIFRIYGQ DPFLVADRTP KLLFSTPKKS KTIRHYKQEE CELVKIDINC HIQGDVVLEC INLNDDTEYE EMIFRLMFNT
0301: AFIRSNILML NRDEIDILWN AKDQFPKDFR AEVLFSDMDA AASVVTVDLS CFEEKDGLPV EAFAKVHEIF SHVDWLDPKT DAALNVLQQI TASNVVQGRV
0401: ETDSPGSVET STSLQELITE KVQGKQKPAS SEDNAEKFSS FALENKHFLS QKPSEGADVN ERKAEPQLQE RQQTAAMERE TMNSTTFSIK NDSGSSSEPS
0501: TFADMSKKKP VSRYHSSSSA TGITPLFPEY ISSDPSLDFS DAHKSVEQKG VSISPPTPLG PHQPLPIQPT LTASATKTLA SPPPPPPPPP PPPVPQQLPQ
0601: LPPHQISASK STHLTLAKQS EKYLQGRDQS SLVPPLPAPE TPVSSISFHE SSSNSTSPSP ALIVTSSTLP PPPPPPPPLK KNLSTRAVPP PPPPPPPPPP
0701: PSHSGKTTSP VPPPPPPAPA FSSKFNPALE DSSHVPAVPP PPATFSKEVS KMDAISPVSY SASGYPAPPA PCGYPAISNG RNMSRTISSR NHQTKKLKPL
0801: HWLKLTRAVS GSLWAETQKS GEASKAPEID MSELESLFSA AAPKSDHGNS SGKSNLRAPA GSKFDKVQLI EHRRAYNCEI MLSKVKVPLH ELMNSVLALE
0901: DSALDVDQVD NLIKFCPTKD EIELLKGYKG EKEKLGKCEQ FLLELMQVPR VETKLRVFSF KIQFPSLVSY LRTSLNVVNS AAEEASYSPI KNSLKLKRIM
1001: QTILQLGNAL NQGTSRGSAI GFRLDSLLKI ADTRARNKKT TLMHYLCKVL ADKLPEVLDF SKDLASLEPA SKIQLKFLAE EMQAISKGLE KVMQELSSSE
1101: NDGPISENFC KTLKKFLHFA ETEVRSLASL YSGVGRNVDA LILYFGEDPA RCPF
0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP
Arabidopsis Description
FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.