Subcellular Localization
min:
: max
Winner_takes_all: vacuole, plasma membrane, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 99.35 | 97.98 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 96.28 | 97.83 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 82.62 | 84.59 |
| AT3G25493.1 | Thale cress | vacuole | 11.99 | 80.62 |
| PGSC0003DMT400056393 | Potato | cytosol | 32.9 | 73.75 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 10.13 | 71.24 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 27.51 | 68.84 |
| Os01t0897700-01 | Rice | cytosol | 15.06 | 66.39 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 34.2 | 65.36 |
| KRH47952 | Soybean | cytosol | 43.4 | 60.18 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 24.54 | 60.14 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 47.4 | 56.11 |
| Solyc06g082910.2.1 | Tomato | extracellular | 48.23 | 55.45 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 48.33 | 55.08 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 55.11 | 54.96 |
| CDY37849 | Canola | endoplasmic reticulum | 25.09 | 51.43 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 48.88 | 50.63 |
| GSMUA_Achr10P... | Banana | plastid | 37.36 | 50.06 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 47.96 | 49.76 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 30.02 | 48.14 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 37.45 | 47.81 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 35.04 | 47.48 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 31.78 | 47.3 |
| CDY44259 | Canola | plasma membrane, vacuole | 36.62 | 46.74 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 40.71 | 46.6 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 40.8 | 46.16 |
| CDX94358 | Canola | mitochondrion, plastid | 6.69 | 46.15 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 40.71 | 46.15 |
| CDY17909 | Canola | golgi, vacuole | 36.34 | 46.11 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 40.8 | 46.02 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 40.24 | 45.53 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 40.24 | 45.29 |
| TraesCS5A01G304700.1 | Wheat | golgi | 32.99 | 45.11 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 32.99 | 45.05 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 32.9 | 45.04 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 39.78 | 44.96 |
| CDY08720 | Canola | mitochondrion | 30.3 | 44.84 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 32.53 | 44.47 |
| Zm00001d021173_P001 | Maize | plasma membrane | 31.13 | 43.96 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 34.11 | 43.74 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 33.92 | 43.45 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 32.53 | 41.18 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 34.48 | 41.13 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 32.16 | 41.09 |
| TraesCS1D01G010200.1 | Wheat | plastid | 20.63 | 39.08 |
| CDY35941 | Canola | plastid | 26.95 | 38.72 |
| TraesCS1B01G059400.1 | Wheat | plastid | 19.98 | 38.19 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 25.19 | 38.01 |
| CDY28040 | Canola | plastid | 26.86 | 37.53 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 18.4 | 37.15 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 24.91 | 37.12 |
| CDX85333 | Canola | plasma membrane | 27.97 | 36.57 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 27.32 | 36.43 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 40.06 | 35.95 |
| HORVU1Hr1G002300.8 | Barley | plastid | 23.51 | 34.94 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 23.51 | 33.96 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 25.0 | 33.79 |
| CDY70125 | Canola | cytosol | 14.96 | 33.54 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 24.72 | 33.13 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 25.09 | 32.53 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.35 | 32.07 |
| CDY22934 | Canola | nucleus, plastid | 21.38 | 31.55 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 23.14 | 31.24 |
| CDY43811 | Canola | golgi | 24.54 | 30.95 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 23.23 | 30.52 |
| CDY43029 | Canola | plasma membrane | 24.44 | 30.48 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 22.58 | 30.41 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 23.51 | 30.15 |
| CDY42470 | Canola | plasma membrane | 24.07 | 30.15 |
| CDY18346 | Canola | plasma membrane | 24.07 | 29.7 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.0 | 29.12 |
| CDY53556 | Canola | nucleus | 22.68 | 28.88 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 15.99 | 27.39 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 19.89 | 27.02 |
| CDY16239 | Canola | vacuole | 17.38 | 26.64 |
| CDY31597 | Canola | mitochondrion | 15.33 | 25.94 |
| CDY55061 | Canola | mitochondrion, nucleus | 17.66 | 25.54 |
| CDY33614 | Canola | mitochondrion, nucleus | 17.29 | 24.16 |
| CDY24501 | Canola | mitochondrion, nucleus | 17.94 | 23.86 |
| CDY27130 | Canola | cytosol, mitochondrion | 6.97 | 19.08 |
| CDX76779 | Canola | cytosol | 15.52 | 14.95 |
| CDY34742 | Canola | cytosol | 15.52 | 14.87 |
| Zm00001d035757_P003 | Maize | plasma membrane | 22.96 | 14.68 |
| CDX99025 | Canola | cytosol | 15.89 | 14.67 |
| CDY12361 | Canola | cytosol | 14.96 | 14.35 |
| CDX69994 | Canola | plastid | 15.8 | 14.32 |
| CDY14029 | Canola | cytosol | 16.08 | 14.05 |
| CDY02799 | Canola | cytosol | 16.26 | 13.99 |
| CDY32721 | Canola | cytosol | 16.08 | 13.91 |
| CDY40774 | Canola | cytosol | 11.9 | 13.75 |
| CDY49153 | Canola | cytosol | 13.38 | 13.74 |
| CDY62689 | Canola | cytosol | 16.45 | 13.7 |
| CDY12294 | Canola | cytosol | 15.43 | 13.62 |
| CDY43877 | Canola | cytosol | 15.33 | 12.52 |
| CDX78309 | Canola | nucleus | 16.64 | 11.96 |
| CDX81069 | Canola | nucleus | 16.08 | 11.91 |
| CDX69993 | Canola | cytosol | 13.2 | 11.71 |
| CDX99026 | Canola | cytosol | 13.48 | 11.41 |
| CDY02798 | Canola | cytosol | 4.37 | 9.59 |
| CDX69992 | Canola | cytosol | 6.13 | 8.72 |
| CDX99027 | Canola | nucleus | 5.2 | 6.49 |
| CDX99029 | Canola | cytosol | 0.09 | 6.25 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | GO:A0A078IQW7 | UniProt:A0A078IQW7 | EnsemblPlants:CDY52291 | ProteinID:CDY52291 |
| ProteinID:CDY52291.1 | ncoils:Coil | InterPro:FH2_Formin | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00006703001 | InterPro:IPR015425 | PFAM:PF02181 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 |
| SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEFD3A | SEG:seg |
Description
BnaA03g57840DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQW7]
Coordinates
chrLK033075:-:55235..58892
Molecular Weight (calculated)
117596.0 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.570
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLFLLFFYFL FSSSALADRR VLHEPFFPVD SPPPSPPQSP PLPKLPFSST TPPDATSPPF FPTYPSPPPP PSPASFASFP ANISSLIVPH ATKSPPSSKK
0101: LLIAAISAVT SAALVAALIA LLYWRRRRGR SSQESNAPDD SKTWTTDSSR RVYPPPPPTT AAPSARRNAE GRTSKQRTTT TTARSSANTS SEFLYLGTMV
0201: NPRGVEDHQS VSNRSNNGSS SRKLESPDLQ PLPPLMKRSF RLNPEVGSIG EEDEEEFYSP RGSASGRETL TRVGSESRRV FSSVPNQNVR SVNNDTISCS
0301: SSSSGSPGRS TFISISPSMS PKRSEPKKTV ISAPEPPPKT SPGSSESSPS KITDFRLVRS PSLSLASLSP RLCPGKNAEG GGLGQISRSP TVTSLTTSPE
0401: RENKEENSLQ NLDDDSPRSS SRSSASTSPE RRPNDTPEAY LRSPVHSSAS TSPYRCFQKS PEVLPAFMSN LRQGLQSQLL SSPGQGFLNE LDALRSEKTS
0501: HKSPPEKGSH DPQSASSSSL SSSPDRDFSH SLDVSPRISS ISSQILQPPV SAARVPPPPP PPPPPFPTWA RRNQATPKVS RPPPLTPPSN PFVIPSENLP
0601: KTSPEETHKE TFSANEPAEE TPKPKLKALH WDKVRASSDR EMVWDQLRSS SFKLDEEMIE TLFVAKSLDS KPNQSQTTPR CVLPSPNQEN RVLDPKKAQN
0701: IAILLRALNV TIEEVCEALL EGNAETLGTE LLESLLKMAP TKEEERKLKE YKDDSPVKLG HAEKFLKAML DIPFAFKRVD AMLYVANFES EVEYLKNSFE
0801: TLEAACEELR NSRMFLKLLE AVLKTGNRMN VGTNRGDAHA FKLDTLLKLV DVKGADGKTT LLHFVVQEII RAEGTRLSGD NNTQTDDIKC RKLGLQVVSS
0901: LSSELSNVKK AAAMDSEVLS SYVSKLSQGI AKINEAIQIQ STVTEESGSS CSERFLESMN TFLKRAEEDI IRVQAQESVA LSLVKEITEY FHGNSAKEEA
1001: HPFRIFLVVR DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMLPQPL PGLFGRKQSS SSSSSSSSDD EHNSSH
0101: LLIAAISAVT SAALVAALIA LLYWRRRRGR SSQESNAPDD SKTWTTDSSR RVYPPPPPTT AAPSARRNAE GRTSKQRTTT TTARSSANTS SEFLYLGTMV
0201: NPRGVEDHQS VSNRSNNGSS SRKLESPDLQ PLPPLMKRSF RLNPEVGSIG EEDEEEFYSP RGSASGRETL TRVGSESRRV FSSVPNQNVR SVNNDTISCS
0301: SSSSGSPGRS TFISISPSMS PKRSEPKKTV ISAPEPPPKT SPGSSESSPS KITDFRLVRS PSLSLASLSP RLCPGKNAEG GGLGQISRSP TVTSLTTSPE
0401: RENKEENSLQ NLDDDSPRSS SRSSASTSPE RRPNDTPEAY LRSPVHSSAS TSPYRCFQKS PEVLPAFMSN LRQGLQSQLL SSPGQGFLNE LDALRSEKTS
0501: HKSPPEKGSH DPQSASSSSL SSSPDRDFSH SLDVSPRISS ISSQILQPPV SAARVPPPPP PPPPPFPTWA RRNQATPKVS RPPPLTPPSN PFVIPSENLP
0601: KTSPEETHKE TFSANEPAEE TPKPKLKALH WDKVRASSDR EMVWDQLRSS SFKLDEEMIE TLFVAKSLDS KPNQSQTTPR CVLPSPNQEN RVLDPKKAQN
0701: IAILLRALNV TIEEVCEALL EGNAETLGTE LLESLLKMAP TKEEERKLKE YKDDSPVKLG HAEKFLKAML DIPFAFKRVD AMLYVANFES EVEYLKNSFE
0801: TLEAACEELR NSRMFLKLLE AVLKTGNRMN VGTNRGDAHA FKLDTLLKLV DVKGADGKTT LLHFVVQEII RAEGTRLSGD NNTQTDDIKC RKLGLQVVSS
0901: LSSELSNVKK AAAMDSEVLS SYVSKLSQGI AKINEAIQIQ STVTEESGSS CSERFLESMN TFLKRAEEDI IRVQAQESVA LSLVKEITEY FHGNSAKEEA
1001: HPFRIFLVVR DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMLPQPL PGLFGRKQSS SSSSSSSSDD EHNSSH
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.