Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 95.37 | 95.61 |
| CDY22934 | Canola | nucleus, plastid | 68.96 | 75.58 |
| CDY53556 | Canola | nucleus | 76.85 | 72.66 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 41.3 | 70.82 |
| CDX94358 | Canola | mitochondrion, plastid | 11.89 | 60.9 |
| PGSC0003DMT400067386 | Potato | cytosol | 23.65 | 54.47 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 30.54 | 49.09 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 45.31 | 45.19 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 34.92 | 42.99 |
| KRH56076 | Soybean | endoplasmic reticulum | 44.31 | 42.04 |
| KRH25436 | Soybean | endoplasmic reticulum, golgi, vacuole | 43.43 | 41.81 |
| CDY42470 | Canola | plasma membrane | 43.55 | 40.51 |
| CDY43811 | Canola | golgi | 43.18 | 40.45 |
| CDY18346 | Canola | plasma membrane | 43.93 | 40.25 |
| CDY43029 | Canola | plasma membrane | 43.43 | 40.21 |
| Solyc07g052730.2.1 | Tomato | golgi | 46.18 | 38.64 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 44.18 | 38.24 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 43.93 | 38.24 |
| GSMUA_Achr2P14090_001 | Banana | mitochondrion | 30.66 | 36.84 |
| CDY70125 | Canola | cytosol | 21.03 | 35.0 |
| CDY37849 | Canola | endoplasmic reticulum | 22.4 | 34.1 |
| Os02t0161100-01 | Rice | golgi | 36.05 | 32.69 |
| EER99497 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 37.05 | 32.64 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 34.67 | 32.59 |
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 34.04 | 32.23 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 34.04 | 32.0 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 33.42 | 31.94 |
| Os07t0545500-01 | Rice | plasma membrane | 37.05 | 31.86 |
| Os04t0100300-00 | Rice | plasma membrane | 32.42 | 31.47 |
| Zm00001d006549_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 36.3 | 31.45 |
| EES04559 | Sorghum | plasma membrane | 33.04 | 30.91 |
| Zm00001d004557_P002 | Maize | golgi, plasma membrane, vacuole | 36.55 | 30.87 |
| EES10325 | Sorghum | golgi | 36.67 | 30.39 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 35.29 | 29.97 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 35.17 | 29.7 |
| CDY08720 | Canola | mitochondrion | 26.53 | 29.16 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 34.92 | 29.15 |
| Zm00001d024947_P005 | Maize | plasma membrane | 36.42 | 29.01 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 29.91 | 28.45 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 26.28 | 28.19 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.28 | 28.09 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 27.66 | 27.83 |
| HORVU2Hr1G043830.5 | Barley | cytosol, nucleus, plastid | 35.54 | 27.63 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 30.91 | 27.38 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 27.16 | 27.26 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.15 | 26.91 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 34.54 | 26.9 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 34.92 | 26.88 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 28.29 | 26.81 |
| CDY44259 | Canola | plasma membrane, vacuole | 28.16 | 26.69 |
| CDY17909 | Canola | golgi, vacuole | 28.29 | 26.65 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 34.79 | 26.53 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 26.53 | 26.4 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 26.16 | 26.39 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 33.04 | 26.09 |
| CDY16239 | Canola | vacuole | 22.78 | 25.93 |
| CDY55061 | Canola | mitochondrion, nucleus | 24.03 | 25.81 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.28 | 25.7 |
| CDY31597 | Canola | mitochondrion | 20.4 | 25.63 |
| CDY33614 | Canola | mitochondrion, nucleus | 23.53 | 24.42 |
| CDY24501 | Canola | mitochondrion, nucleus | 24.16 | 23.86 |
| CDY35941 | Canola | plastid | 21.65 | 23.1 |
| CDY28040 | Canola | plastid | 21.9 | 22.73 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.41 | 22.58 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.91 | 22.57 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 20.02 | 22.16 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 19.52 | 21.88 |
| CDX85333 | Canola | plasma membrane | 22.53 | 21.87 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 21.65 | 21.44 |
| CDY27130 | Canola | cytosol, mitochondrion | 9.51 | 19.34 |
| CDX99025 | Canola | cytosol | 19.52 | 13.38 |
| HORVU2Hr1G006690.1 | Barley | peroxisome | 14.52 | 13.29 |
| CDY40774 | Canola | cytosol | 15.27 | 13.1 |
| CDY12361 | Canola | cytosol | 18.15 | 12.92 |
| CDX69994 | Canola | plastid | 18.9 | 12.72 |
| CDY14029 | Canola | cytosol | 19.52 | 12.67 |
| CDX99029 | Canola | cytosol | 0.25 | 12.5 |
| CDY49153 | Canola | cytosol | 16.27 | 12.4 |
| CDX76779 | Canola | cytosol | 17.02 | 12.18 |
| CDY32721 | Canola | cytosol | 18.65 | 11.98 |
| CDY34742 | Canola | cytosol | 16.77 | 11.93 |
| CDY02799 | Canola | cytosol | 18.65 | 11.91 |
| CDY62689 | Canola | cytosol | 19.15 | 11.84 |
| CDY12294 | Canola | cytosol | 17.77 | 11.65 |
| CDY43877 | Canola | cytosol | 18.15 | 11.0 |
| CDX69993 | Canola | cytosol | 16.15 | 10.63 |
| CDX78309 | Canola | nucleus | 19.65 | 10.49 |
| CDX81069 | Canola | nucleus | 18.77 | 10.33 |
| CDX99026 | Canola | cytosol | 16.02 | 10.07 |
| CDY02798 | Canola | cytosol | 4.76 | 7.76 |
| CDX69992 | Canola | cytosol | 6.63 | 7.0 |
| CDX99027 | Canola | nucleus | 5.01 | 4.63 |
Protein Annotations
| EnsemblPlants:CDY06511 | EnsemblPlantsGene:GSBRNA2T00122617001 | Gene3D:1.20.58.2220 | GO:A0A078EZG4 | InterPro:FH2_Formin | InterPro:IPR015425 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF195 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDY06511 | ProteinID:CDY06511.1 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0004EF2503 |
| MapMan:20.2.2.6.1 | : | : | : | : | : |
Description
BnaC06g11330D
Coordinates
chrLK031970:-:1003929..1006975
Molecular Weight (calculated)
87987.3 Da
IEP (calculated)
9.700
GRAVY (calculated)
-0.437
Length
799 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLTKAFLA IFLVVLVCVS VEIIARDGAN RLRSSVSEEA HGVDMAEQTK IHCRKELKDE NKDCLVYISR EAAAANGYLK LSVLTGYRHW FGPLLDSTTS
101: YPRRKLISKK KKFTVSAPNF ALGPAPRLTP GPAPTSRNYD RAPSTSPSQP SSHSPPDESN SAPVKRKPSV VAPSPSVVLS PAKKYDILME LIIAVASTAV
201: LTFFLVALLF LCCFRRNRGP RDGPRDEGQF LHLVDLSPGS NETSPAVANP SRRFFSASSK KKSFLSRMSL KRTTGHDQLS TAQASTSSGH PPPLKLPPGR
301: TAAPPPPAPP QPPPPPKSKP PPPPKLVRPP PAPPKGAAGK RQGHSSSGDA SDVDSETGAA KTKLKPFFWD KMANPDQKMV WHEISAGSFQ FNEEAMESLF
401: GYNDGNKNKS GQRGESSRDS PVQYIQIIDP RKAQNLSILL RALNVTTEEV VEAIKEGNEL PVELLQTLLK MAPTTEEELK LRLYSGDVNL LGPAERFLKI
501: LVDIPFAFKR IESLLFMISL QEEVSGIKES LSTLEVACKK LRNSRLFLKL LEAVLKTGNR MNVGTFRGDA QAFKLDTLLK LSDVKGTDGK TTLLNFVVLE
601: IIRSEGVRAL RLQSKSFSSV RTEEDTNNNS TDSKLEDVKR AAVIDADGLA ATLTNLSGSL TNAREFLKSM EEESDFEKAL AGFIERADAD IKWMKEEEER
701: IMALVKSSAD YFHGKSAKNE GLRLFAIVRD FLIMLEKVCR QIKETTTSAT KTRTHSGKKE TQVMMMQDSN QPSTDNIQHR LFPAIAERRD DSSDDSDDE
101: YPRRKLISKK KKFTVSAPNF ALGPAPRLTP GPAPTSRNYD RAPSTSPSQP SSHSPPDESN SAPVKRKPSV VAPSPSVVLS PAKKYDILME LIIAVASTAV
201: LTFFLVALLF LCCFRRNRGP RDGPRDEGQF LHLVDLSPGS NETSPAVANP SRRFFSASSK KKSFLSRMSL KRTTGHDQLS TAQASTSSGH PPPLKLPPGR
301: TAAPPPPAPP QPPPPPKSKP PPPPKLVRPP PAPPKGAAGK RQGHSSSGDA SDVDSETGAA KTKLKPFFWD KMANPDQKMV WHEISAGSFQ FNEEAMESLF
401: GYNDGNKNKS GQRGESSRDS PVQYIQIIDP RKAQNLSILL RALNVTTEEV VEAIKEGNEL PVELLQTLLK MAPTTEEELK LRLYSGDVNL LGPAERFLKI
501: LVDIPFAFKR IESLLFMISL QEEVSGIKES LSTLEVACKK LRNSRLFLKL LEAVLKTGNR MNVGTFRGDA QAFKLDTLLK LSDVKGTDGK TTLLNFVVLE
601: IIRSEGVRAL RLQSKSFSSV RTEEDTNNNS TDSKLEDVKR AAVIDADGLA ATLTNLSGSL TNAREFLKSM EEESDFEKAL AGFIERADAD IKWMKEEEER
701: IMALVKSSAD YFHGKSAKNE GLRLFAIVRD FLIMLEKVCR QIKETTTSAT KTRTHSGKKE TQVMMMQDSN QPSTDNIQHR LFPAIAERRD DSSDDSDDE
001: MGRLRLAFLA ISLVVFVCVS EEIFSRGGLN LLRFSVYGED AEQTWIHQNP RRKLISYPKK FSVSAPNLAF GPAPSFAPGP GPSFAPGPAP NPRSYDWLAP
101: ASSPNEPPAE TPDESSPSPS EETPSVVAPS QSVPGPPRPP PQREKKDDIL MKLIIAVAST AVLTFVFVAL MFLCCFKRNC NNAVGSRDGP RDEGPLLRLS
201: TGSTENSPTV ASTSRKMFSV ASSKKRSFLS RVSLKRNGHE FSTAESSSAA GLPPLKLPPG RSAPPPPPAA APPPQPPPPP PPKPQPPPPP KIARPPPAPP
301: KGAAPKRQGN TSSGDASDVD SETGAPKTKL KPFFWDKMAN PDQKMVWHEI SAGSFQFNEE AMESLFGYND GNKNKNGQKS TDSSLRESPL QYIQIIDTRK
401: AQNLSILLRA LNVTTEEVVD AIKEGNELPV ELLQTLLKMA PTSEEELKLR LYSGDLHLLG PRSGS
101: ASSPNEPPAE TPDESSPSPS EETPSVVAPS QSVPGPPRPP PQREKKDDIL MKLIIAVAST AVLTFVFVAL MFLCCFKRNC NNAVGSRDGP RDEGPLLRLS
201: TGSTENSPTV ASTSRKMFSV ASSKKRSFLS RVSLKRNGHE FSTAESSSAA GLPPLKLPPG RSAPPPPPAA APPPQPPPPP PPKPQPPPPP KIARPPPAPP
301: KGAAPKRQGN TSSGDASDVD SETGAPKTKL KPFFWDKMAN PDQKMVWHEI SAGSFQFNEE AMESLFGYND GNKNKNGQKS TDSSLRESPL QYIQIIDTRK
401: AQNLSILLRA LNVTTEEVVD AIKEGNELPV ELLQTLLKMA PTSEEELKLR LYSGDLHLLG PRSGS
Arabidopsis Description
AFH3formin 3 [Source:TAIR;Acc:AT4G15200]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.