Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 79.47 | 77.84 |
| Bra016233.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 79.34 | 75.19 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 60.53 | 73.25 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 48.95 | 70.19 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 29.21 | 52.24 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 52.24 | 48.65 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 49.34 | 47.77 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 50.0 | 47.5 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 50.13 | 46.52 |
| KRH74702 | Soybean | endoplasmic reticulum | 45.39 | 42.49 |
| KRG99223 | Soybean | golgi, vacuole | 43.16 | 42.38 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 43.68 | 42.03 |
| KRH69441 | Soybean | golgi, plasma membrane | 44.34 | 41.92 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 41.71 | 41.82 |
| AT1G59910.1 | Thale cress | nucleus | 45.53 | 37.24 |
| EES05554 | Sorghum | plasma membrane | 43.29 | 35.76 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.37 | 35.74 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.24 | 35.63 |
| TraesCS6A01G312000.2 | Wheat | plastid | 41.97 | 35.17 |
| Zm00001d017983_P001 | Maize | plasma membrane | 42.24 | 34.85 |
| KXG39193 | Sorghum | plastid | 38.82 | 34.62 |
| HORVU6Hr1G076870.4 | Barley | plastid | 42.5 | 34.47 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 29.87 | 25.25 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 29.21 | 24.67 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.5 | 23.38 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 25.79 | 22.17 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.74 | 21.5 |
| AT3G25493.1 | Thale cress | vacuole | 4.47 | 21.25 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 21.32 | 20.72 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 12.63 | 20.6 |
| AT3G07540.1 | Thale cress | plasma membrane | 22.76 | 20.57 |
| AT3G32400.2 | Thale cress | cytosol | 13.16 | 20.2 |
| AT5G07780.1 | Thale cress | plastid | 11.97 | 19.61 |
| AT1G42980.1 | Thale cress | cytosol | 5.79 | 14.72 |
| AT5G07770.3 | Thale cress | plastid | 13.29 | 13.85 |
| AT1G31810.1 | Thale cress | cytosol | 19.87 | 12.28 |
| AT2G25050.1 | Thale cress | cytosol | 18.16 | 11.82 |
| AT5G07650.1 | Thale cress | cytosol | 11.84 | 11.04 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 11.84 | 10.38 |
| AT5G58160.1 | Thale cress | cytosol | 16.97 | 10.19 |
| AT3G32420.1 | Thale cress | cytosol | 1.32 | 9.35 |
| AT5G07740.2 | Thale cress | nucleus | 19.21 | 8.67 |
Protein Annotations
| MapMan:20.2.2.6.1 | EntrezGene:843350 | ProteinID:AAB61101.1 | ProteinID:AEE35024.1 | ArrayExpress:AT1G70140 | EnsemblPlantsGene:AT1G70140 |
| RefSeq:AT1G70140 | TAIR:AT1G70140 | RefSeq:AT1G70140-TAIR-G | EnsemblPlants:AT1G70140.1 | TAIR:AT1G70140.1 | Symbol:ATFH8 |
| Unigene:At.35341 | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005522 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005911 | GO:GO:0008150 |
| GO:GO:0009653 | GO:GO:0009932 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0045010 | GO:GO:0051015 | InterPro:IPR015425 | RefSeq:NP_177171.1 |
| UniProt:O04532 | PFAM:PF02181 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 |
| PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01217 | PFscan:PS51444 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF239 | SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009FF68 |
| SEG:seg | : | : | : | : | : |
Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
Coordinates
chr1:-:26412500..26415258
Molecular Weight (calculated)
83607.4 Da
IEP (calculated)
9.543
GRAVY (calculated)
-0.372
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.