Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22908117
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g047770.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10020.1 | Solyc07g047770.2.1 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007051 | Potato | cytosol | 58.74 | 84.03 |
| KRH67831 | Soybean | cytosol | 40.29 | 54.97 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 40.29 | 54.61 |
| KRG96117 | Soybean | nucleus | 38.35 | 54.11 |
| CDY00899 | Canola | cytosol | 34.47 | 46.71 |
| Bra029811.1-P | Field mustard | cytosol | 33.98 | 46.05 |
| CDY60157 | Canola | cytosol | 33.98 | 45.75 |
| AT3G10020.1 | Thale cress | cytosol | 33.01 | 45.64 |
| Bra001291.1-P | Field mustard | cytosol | 31.55 | 43.05 |
| CDX74003 | Canola | cytosol | 31.55 | 43.05 |
| Solyc09g008970.1.1 | Tomato | cytosol | 27.18 | 41.18 |
| CDY66900 | Canola | cytosol | 30.1 | 41.06 |
| Os12t0147200-01 | Rice | plastid | 29.13 | 40.82 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 28.64 | 40.69 |
| TraesCS1A01G416700.1 | Wheat | cytosol | 28.16 | 40.0 |
| TraesCS1D01G424500.1 | Wheat | cytosol | 26.7 | 39.01 |
| CDX71716 | Canola | cytosol | 19.42 | 38.84 |
| CDX91281 | Canola | cytosol | 18.93 | 37.86 |
| Zm00001d023387_P001 | Maize | cytosol | 27.18 | 37.84 |
| CDX91279 | Canola | cytosol | 18.45 | 36.89 |
| Os11t0149200-00 | Rice | plastid | 24.27 | 34.25 |
| KXG22962 | Sorghum | plastid | 30.1 | 28.7 |
| Zm00001d008484_P001 | Maize | cytosol | 19.9 | 20.6 |
| Zm00001d008473_P001 | Maize | cytosol | 11.16 | 17.56 |
Protein Annotations
| EnsemblPlants:Solyc09g008980.1.1 | EnsemblPlantsGene:Solyc09g008980.1 | PANTHER:PTHR12626 | PANTHER:PTHR12626:SF2 | SEG:seg | UniParc:UPI000276C2D4 |
| UniProt:K4CQS9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:2348996..2351852
Molecular Weight (calculated)
23230.2 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.722
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPIDDKKET VTFRAVSHDE EGKTKITKLE TNTHNIETLK HMEKKLVDKG VHRKDRRSID GIPLNKQSKS GHGGKFTWEG PRDAMEYELD DDLPVAIDEN
101: DPNYVDQEEE RRLLRGEVSG VEGLVVGEID VAKVVDEGVA RVHVVDRVLQ ENIHSRYYLL LIFRYLNCLS DSQTEEAVTT IAEVQHPEHP QAGGPAQKAV
201: AEPVET
101: DPNYVDQEEE RRLLRGEVSG VEGLVVGEID VAKVVDEGVA RVHVVDRVLQ ENIHSRYYLL LIFRYLNCLS DSQTEEAVTT IAEVQHPEHP QAGGPAQKAV
201: AEPVET
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.