Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d014297_P006 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10020.1 | Zm00001d014297_P006 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008473_P001 | Maize | cytosol | 38.19 | 58.02 |
| Zm00001d023387_P001 | Maize | cytosol | 39.7 | 53.38 |
| TraesCS1D01G424500.1 | Wheat | cytosol | 33.67 | 47.52 |
| TraesCS1A01G416700.1 | Wheat | cytosol | 34.17 | 46.9 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 32.16 | 44.14 |
| Os11t0149200-00 | Rice | plastid | 31.16 | 42.47 |
| Os12t0147200-01 | Rice | plastid | 29.65 | 40.14 |
| CDX71716 | Canola | cytosol | 20.6 | 39.81 |
| CDX91281 | Canola | cytosol | 20.6 | 39.81 |
| CDX91279 | Canola | cytosol | 19.1 | 36.89 |
| CDY66900 | Canola | cytosol | 27.64 | 36.42 |
| CDX74003 | Canola | cytosol | 27.14 | 35.76 |
| KXG22962 | Sorghum | plastid | 38.69 | 35.65 |
| Bra001291.1-P | Field mustard | cytosol | 26.63 | 35.1 |
| KRH67831 | Soybean | cytosol | 25.13 | 33.11 |
| KRG96117 | Soybean | nucleus | 24.12 | 32.88 |
| CDY00899 | Canola | cytosol | 24.12 | 31.58 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 24.12 | 31.58 |
| Bra029811.1-P | Field mustard | cytosol | 23.62 | 30.92 |
| CDY60157 | Canola | cytosol | 23.62 | 30.72 |
| AT3G10020.1 | Thale cress | cytosol | 22.61 | 30.2 |
| PGSC0003DMT400007051 | Potato | cytosol | 20.6 | 28.47 |
| PGSC0003DMT400007053 | Potato | cytosol | 19.6 | 26.9 |
| Solyc09g008970.1.1 | Tomato | cytosol | 17.09 | 25.0 |
| Solyc09g008980.1.1 | Tomato | plastid | 20.6 | 19.9 |
Protein Annotations
| EnsemblPlants:Zm00001d008484_P001 | EnsemblPlants:Zm00001d008484_T001 | EnsemblPlantsGene:Zm00001d008484 | ProteinID:AQK89957.1 | SEG:seg | UniParc:UPI000220FCA1 |
| UniProt:K7VPG1 | MapMan:35.2 | : | : | : | : |
Description
AT3g10020/T22K18_16; Expressed protein; protein
Coordinates
chr8:-:9868196..9869105
Molecular Weight (calculated)
21719.8 Da
IEP (calculated)
5.601
GRAVY (calculated)
-0.367
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSTLAAVSR PSSTDASVHA CGEEDGGPRD VAPNTAKNFE CKLEERGLHR FERHLENAPH GMGIDTPPPK SRCDGRYTWE GLGVIVEGQL NPAPPTIDPN
101: YEVVKEGGAI DDEVAREVVV EEVKIAKVAE SKDDVARGPC LLSQPAVLST MDRPQVAVNS HTRASSHRKA WCREQHASIM KIVLICVFDL PFFSVLEVP
101: YEVVKEGGAI DDEVAREVVV EEVKIAKVAE SKDDVARGPC LLSQPAVLST MDRPQVAVNS HTRASSHRKA WCREQHASIM KIVLICVFDL PFFSVLEVP
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.