Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029811.1-P | Field mustard | cytosol | 86.58 | 84.87 |
| CDY60157 | Canola | cytosol | 86.58 | 84.31 |
| CDY00899 | Canola | cytosol | 84.56 | 82.89 |
| KRH67831 | Soybean | cytosol | 56.38 | 55.63 |
| KRG96117 | Soybean | nucleus | 51.68 | 52.74 |
| PGSC0003DMT400007053 | Potato | cytosol | 50.34 | 51.72 |
| TraesCS1D01G424500.1 | Wheat | cytosol | 47.65 | 50.35 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 51.01 | 50.0 |
| TraesCS1A01G416700.1 | Wheat | cytosol | 48.32 | 49.66 |
| Solyc09g008970.1.1 | Tomato | cytosol | 44.97 | 49.26 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 46.31 | 47.59 |
| PGSC0003DMT400007051 | Potato | cytosol | 44.97 | 46.53 |
| Os11t0149200-00 | Rice | plastid | 44.97 | 45.89 |
| Os12t0147200-01 | Rice | plastid | 44.3 | 44.9 |
| Zm00001d023387_P001 | Maize | cytosol | 44.3 | 44.59 |
| Solyc09g008980.1.1 | Tomato | plastid | 45.64 | 33.01 |
| KXG22962 | Sorghum | plastid | 45.64 | 31.48 |
| Zm00001d008473_P001 | Maize | cytosol | 20.81 | 23.66 |
| Zm00001d008484_P001 | Maize | cytosol | 30.2 | 22.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820163 | UniProt:A0A178V6S2 | ProteinID:AAF04421.1 | ProteinID:AEE74849.1 | ArrayExpress:AT3G10020 |
| EnsemblPlantsGene:AT3G10020 | RefSeq:AT3G10020 | TAIR:AT3G10020 | RefSeq:AT3G10020-TAIR-G | EnsemblPlants:AT3G10020.1 | TAIR:AT3G10020.1 |
| EMBL:AY048222 | EMBL:AY052262 | EMBL:AY054173 | EMBL:AY088481 | EMBL:AY091708 | GO:GO:0006091 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009061 | GO:GO:0009987 |
| RefSeq:NP_566365.1 | ProteinID:OAP01917.1 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12626 | PANTHER:PTHR12626:SF2 | UniProt:Q9SR67 |
| UniParc:UPI00000A582F | : | : | : | : | : |
Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
Coordinates
chr3:-:3090806..3091922
Molecular Weight (calculated)
16737.6 Da
IEP (calculated)
5.004
GRAVY (calculated)
-1.100
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.