Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G424500.1 | Wheat | cytosol | 92.41 | 95.04 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 91.03 | 91.03 |
| Zm00001d023387_P001 | Maize | cytosol | 77.24 | 75.68 |
| Os12t0147200-01 | Rice | plastid | 71.03 | 70.07 |
| KXG22962 | Sorghum | plastid | 77.24 | 51.85 |
| CDX71716 | Canola | cytosol | 36.55 | 51.46 |
| CDX91281 | Canola | cytosol | 35.86 | 50.49 |
| Bra001291.1-P | Field mustard | cytosol | 52.41 | 50.33 |
| CDX74003 | Canola | cytosol | 52.41 | 50.33 |
| KRG96117 | Soybean | nucleus | 49.66 | 49.32 |
| CDY66900 | Canola | cytosol | 51.03 | 49.01 |
| CDY00899 | Canola | cytosol | 51.03 | 48.68 |
| CDX91279 | Canola | cytosol | 34.48 | 48.54 |
| CDY60157 | Canola | cytosol | 51.03 | 48.37 |
| AT3G10020.1 | Thale cress | cytosol | 49.66 | 48.32 |
| Bra029811.1-P | Field mustard | cytosol | 50.34 | 48.03 |
| KRH67831 | Soybean | cytosol | 48.28 | 46.36 |
| PGSC0003DMT400007053 | Potato | cytosol | 46.21 | 46.21 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 45.52 | 43.42 |
| Solyc09g008970.1.1 | Tomato | cytosol | 39.31 | 41.91 |
| PGSC0003DMT400007051 | Potato | cytosol | 40.0 | 40.28 |
| Zm00001d008484_P001 | Maize | cytosol | 46.9 | 34.17 |
| Zm00001d008473_P001 | Maize | cytosol | 29.66 | 32.82 |
| Solyc09g008980.1.1 | Tomato | plastid | 40.0 | 28.16 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G416700.1 | EnsemblPlantsGene:TraesCS1A01G416700 | GO:GO:0006091 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009061 | GO:GO:0009987 | PANTHER:PTHR12626 | PANTHER:PTHR12626:SF2 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:574938084..574938521
Molecular Weight (calculated)
15913.5 Da
IEP (calculated)
4.970
GRAVY (calculated)
-0.967
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVVHRDEEG HKVAEKLPVP ETRRPDTARH VERKLEEQGL HRLERHPANA PRGVGIGAPP PKSGRGGKYT WEGPEGLVDS ELDPAPAAID RNDPNYDEEE
101: GGEQDEVAKE VVVGEVEVAK VAQARAGVAR VEVAPPLLQD HDHQQ
101: GGEQDEVAKE VVVGEVEVAK VAQARAGVAR VEVAPPLLQD HDHQQ
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.