Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74003 | Canola | cytosol | 95.36 | 95.36 |
| CDX71716 | Canola | cytosol | 62.25 | 91.26 |
| CDX91281 | Canola | cytosol | 59.6 | 87.38 |
| CDX91279 | Canola | cytosol | 57.62 | 84.47 |
| CDY60157 | Canola | cytosol | 84.11 | 83.01 |
| CDY00899 | Canola | cytosol | 82.12 | 81.58 |
| KRH67831 | Soybean | cytosol | 56.29 | 56.29 |
| KRG96117 | Soybean | nucleus | 52.32 | 54.11 |
| PGSC0003DMT400007053 | Potato | cytosol | 50.99 | 53.1 |
| Solyc09g008970.1.1 | Tomato | cytosol | 46.36 | 51.47 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 51.66 | 51.32 |
| TraesCS1D01G424500.1 | Wheat | cytosol | 47.68 | 51.06 |
| TraesCS1A01G416700.1 | Wheat | cytosol | 49.01 | 51.03 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 46.36 | 48.28 |
| Os11t0149200-00 | Rice | plastid | 45.7 | 47.26 |
| Zm00001d023387_P001 | Maize | cytosol | 45.7 | 46.62 |
| Os12t0147200-01 | Rice | plastid | 43.71 | 44.9 |
| PGSC0003DMT400007051 | Potato | cytosol | 40.4 | 42.36 |
| KXG22962 | Sorghum | plastid | 47.02 | 32.87 |
| Solyc09g008980.1.1 | Tomato | plastid | 41.06 | 30.1 |
| Zm00001d008473_P001 | Maize | cytosol | 24.5 | 28.24 |
| Zm00001d008484_P001 | Maize | cytosol | 36.42 | 27.64 |
Protein Annotations
| EnsemblPlants:CDY66900 | EnsemblPlantsGene:GSBRNA2T00056816001 | PANTHER:PTHR12626 | PANTHER:PTHR12626:SF2 | ProteinID:CDY66900 | ProteinID:CDY66900.1 |
| SEG:seg | UniParc:UPI0004EF3299 | UniProt:A0A078JKD5 | MapMan:35.2 | : | : |
Description
BnaC03g73280DBnaC03g73280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JKD5]
Coordinates
chrLK035565:-:6764..7475
Molecular Weight (calculated)
16697.6 Da
IEP (calculated)
4.760
GRAVY (calculated)
-1.046
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTVSVDETK NTVVLRAEHR DEEGRKAVDK LELKTRNPDM IKQVEKKLME KGVQRMERHP SDGTQIKRPP PKSGHGGKYT WEGAGRMEDY EMQPDPPAMD
101: EGDPNYDEEK IGGGGGDDVA VEVVKGEVEV ANEAPGGVAR VEVDPRLFST P
101: EGDPNYDEEK IGGGGGDDVA VEVVKGEVEV ANEAPGGVAR VEVDPRLFST P
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.