Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91281 | Canola | cytosol | 95.15 | 95.15 |
| CDX91279 | Canola | cytosol | 92.23 | 92.23 |
| CDY66900 | Canola | cytosol | 91.26 | 62.25 |
| CDX74003 | Canola | cytosol | 90.29 | 61.59 |
| CDY60157 | Canola | cytosol | 77.67 | 52.29 |
| CDY00899 | Canola | cytosol | 75.73 | 51.32 |
| KRH67831 | Soybean | cytosol | 57.28 | 39.07 |
| KRG96117 | Soybean | nucleus | 53.4 | 37.67 |
| TraesCS1D01G424500.1 | Wheat | cytosol | 50.49 | 36.88 |
| TraesCS1A01G416700.1 | Wheat | cytosol | 51.46 | 36.55 |
| Solyc09g008970.1.1 | Tomato | cytosol | 47.57 | 36.03 |
| PGSC0003DMT400007053 | Potato | cytosol | 50.49 | 35.86 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 49.51 | 35.17 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 51.46 | 34.87 |
| Os11t0149200-00 | Rice | plastid | 48.54 | 34.25 |
| Zm00001d023387_P001 | Maize | cytosol | 47.57 | 33.11 |
| Os12t0147200-01 | Rice | plastid | 45.63 | 31.97 |
| Zm00001d008473_P001 | Maize | cytosol | 33.01 | 25.95 |
| PGSC0003DMT400007051 | Potato | cytosol | 35.92 | 25.69 |
| KXG22962 | Sorghum | plastid | 45.63 | 21.76 |
| Zm00001d008484_P001 | Maize | cytosol | 39.81 | 20.6 |
| Solyc09g008980.1.1 | Tomato | plastid | 38.84 | 19.42 |
Protein Annotations
| EnsemblPlants:CDX71716 | EnsemblPlantsGene:GSBRNA2T00155405001 | ProteinID:CDX71716 | ProteinID:CDX71716.1 | SEG:seg | UniParc:UPI0004EE3805 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g31580D
Coordinates
chrLK031795:+:120086..120397
Molecular Weight (calculated)
11103.9 Da
IEP (calculated)
4.366
GRAVY (calculated)
-1.054
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKGVQRMER HPSDGTQIRR PPPKSGHGGK YTWEGAARME DYEMQPDPPA MDEGDLNYDE EKIGGGGGDD MAVEVGKGEV EVAKEAPGGV ARAEVDPRLI
101: SPP
101: SPP
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.