Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G416700.1 | Wheat | cytosol | 95.04 | 92.41 |
| TraesCS1B01G446900.1 | Wheat | cytosol | 90.78 | 88.28 |
| Zm00001d023387_P001 | Maize | cytosol | 80.85 | 77.03 |
| Os12t0147200-01 | Rice | plastid | 75.18 | 72.11 |
| KXG22962 | Sorghum | plastid | 78.72 | 51.39 |
| CDX71716 | Canola | cytosol | 36.88 | 50.49 |
| CDX91281 | Canola | cytosol | 36.17 | 49.51 |
| Bra001291.1-P | Field mustard | cytosol | 52.48 | 49.01 |
| CDX74003 | Canola | cytosol | 52.48 | 49.01 |
| KRG96117 | Soybean | nucleus | 50.35 | 48.63 |
| CDY66900 | Canola | cytosol | 51.06 | 47.68 |
| AT3G10020.1 | Thale cress | cytosol | 50.35 | 47.65 |
| CDX91279 | Canola | cytosol | 34.75 | 47.57 |
| CDY00899 | Canola | cytosol | 51.06 | 47.37 |
| Bra029811.1-P | Field mustard | cytosol | 50.35 | 46.71 |
| CDY60157 | Canola | cytosol | 50.35 | 46.41 |
| KRH67831 | Soybean | cytosol | 48.94 | 45.7 |
| PGSC0003DMT400007053 | Potato | cytosol | 46.1 | 44.83 |
| VIT_08s0007g04000.t01 | Wine grape | cytosol | 46.81 | 43.42 |
| Solyc09g008970.1.1 | Tomato | cytosol | 39.01 | 40.44 |
| PGSC0003DMT400007051 | Potato | cytosol | 40.43 | 39.58 |
| Zm00001d008484_P001 | Maize | cytosol | 47.52 | 33.67 |
| Zm00001d008473_P001 | Maize | cytosol | 31.21 | 33.59 |
| Solyc09g008980.1.1 | Tomato | plastid | 39.01 | 26.7 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G424500.1 | EnsemblPlantsGene:TraesCS1D01G424500 | GO:GO:0006091 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009061 | GO:GO:0009987 | PANTHER:PTHR12626 | PANTHER:PTHR12626:SF2 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:478819630..478820055
Molecular Weight (calculated)
15485.0 Da
IEP (calculated)
4.965
GRAVY (calculated)
-0.911
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVVHRDEEG HKVAEKVPVP ETRRPDTARH VERKLEEQGL HRLERHPANA PRGVGIGAPP PKSGRGGKYT WEGPEGLVDS ELDPAPAAID RNDPNYEEEG
101: EQDEVAEEVV VGEVEVAKVA QARAGVARVE VAPPLLHDHQ Q
101: EQDEVAEEVV VGEVEVAKVA QARAGVARVE VAPPLLHDHQ Q
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
Arabidopsis Description
AT3g10020/T22K18_16 [Source:UniProtKB/TrEMBL;Acc:Q9SR67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.