CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
golgi 2
plasma membrane 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93074	Canola	plasma membrane	95.63	95.81
CDX74635	Canola	cytosol, golgi, plasma membrane	71.7	68.58
CDY47297	Canola	plasma membrane	71.06	67.97
GSMUA_Achr4P17470_001	Banana	cytosol	44.59	63.23
GSMUA_AchrUn_...	Banana	cytosol	50.96	58.82
Zm00001d014297_P006	Maize	cytosol	48.77	56.96
PGSC0003DMT400015729	Potato	cytosol	18.29	54.62
VIT_12s0057g00690.t01	Wine grape	endoplasmic reticulum, golgi	62.97	54.4
Solyc07g047770.2.1	Tomato	golgi	60.05	53.44
KRH14106	Soybean	mitochondrion	58.96	52.9
CDY03102	Canola	cytosol	3.46	52.78
KRH74010	Soybean	mitochondrion, plasma membrane	58.51	52.66
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	47.68	52.35
GSMUA_Achr1P22740_001	Banana	cytosol	38.67	52.21
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	48.32	52.01
CDY03106	Canola	cytosol	3.37	51.39
CDY17631	Canola	cytosol, peroxisome, plasma membrane	46.5	48.57
CDY03101	Canola	cytosol, peroxisome, plasma membrane	46.41	48.48
Os10t0362300-03	Rice	extracellular	51.77	47.94
CDY64702	Canola	mitochondrion	3.64	30.53
CDY21123	Canola	cytosol	6.55	24.0
CDY49633	Canola	cytosol	14.83	22.18
CDY07498	Canola	cytosol	14.83	22.15
CDY49629	Canola	cytosol	2.64	20.86
CDX80113	Canola	plasma membrane	11.56	20.72
CDX97049	Canola	nucleus	16.65	20.42
CDX78398	Canola	cytosol	11.65	20.38
CDX69808	Canola	nucleus	16.56	20.27
CDY63851	Canola	plasma membrane	11.46	20.22
CDY40112	Canola	nucleus	16.83	20.2
CDY67688	Canola	nucleus	16.56	19.98
CDY66567	Canola	cytosol	2.64	19.86
CDY35503	Canola	plasma membrane	13.92	19.64
CDY70443	Canola	plasma membrane	13.92	19.62
CDY30004	Canola	plasma membrane	13.01	18.67
CDY20843	Canola	nucleus	19.47	17.94
CDY24380	Canola	nucleus	19.38	17.84
CDX90318	Canola	cytosol	4.73	16.88
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	16.29	16.81
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	16.92	16.71
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	16.2	16.67
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	16.74	16.11
CDY67999	Canola	plasma membrane	8.83	15.67
CDX86641	Canola	endoplasmic reticulum	8.37	15.46
CDY70681	Canola	endoplasmic reticulum	8.55	15.23
CDX70367	Canola	endoplasmic reticulum, golgi	17.02	13.63
CDX78397	Canola	cytosol	4.46	12.73
CDY15498	Canola	plasma membrane	11.01	7.08

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	GO:A0A078IJG8	UniProt:A0A078IJG8
EnsemblPlants:CDY50037	ProteinID:CDY50037	ProteinID:CDY50037.1	InterPro:CHASE_dom	InterPro:CheY-like_superfamily	ncoils:Coil
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00095793001
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789
InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518
PFAM:PF03924	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719
PANTHER:PTHR43719:SF16	SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0004EE817C
SEG:seg	:	:	:	:	:

Description

BnaC03g44990DBnaC03g44990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJG8]

Coordinates

chrLK032876:+:7851..13491

Molecular Weight (calculated)

122268.0 Da

IEP (calculated)

5.550

GRAVY (calculated)

-0.236

Length

1099 amino acids

Sequence
(BLAST)

0001: MSIACELSNP NSKKTKAEKR ITTKILLIRV LCGLVVIWLC SSLSSGFLCI CKKKESASDD ESSSSAKGML FRNQKNVSRS EIDAMLSLFF DSNQVTSFEC
0101: RKESDGITCS LSTRSEKEED EEEEAKRHVV AELMSSSDNE EEGVGGGRMI FARKEVSSFV QDKQQQQQQC KRAGKWSKNM LLLCIIAGVS LSVLWFWDTN
0201: EEILFQRKET LTNMCEERAR VLQDQFNVSM NHVHALSILV STFHHGKTPS AIDQKTFGEY TERTNFERPL TSGVAYALKV THSEREKFEK EHGWSIKKMD
0301: FEDQTLVQGF DPAPVQDEYA PVIFAQETVS HIVSVDMMSG KEDRENILRA RALGKGVLTS PFQLLKSNHL GVILTFAVYN TNLPHDATEE ERIQATIGYL
0401: GASYDMPSLV EKLLQQLASK QTISVNVYDT TNASSVIKMY GSEVGDMSEE HISSLDFGDP FRKHEMHCRF TQKPPIPWLA ILPPGFALVI TFLLGHIFNG
0501: AINRIATVEE DYQKMMELKA RAEAADVAKS QFLATVSHEI RTPMVGVLGM LKLLMDTDLD AKQLDFAETA HGSGKDLISL INEVLDQAKI ESGRLELENV
0601: PFDLRFLLDN VSSLLSGKAA EKGIELAVYV SSNVPAVIVG DPGRFRQIIT NLVGNSIKFT QEKGHIFISV HLTNEVREPF ETEDEILKQR LGSDETSCNT
0701: LSGYPAVNAS GSWRNFKTFQ DHSCDKTELL VTVEDTGVGI PVDAQSRIFT PFMQADSSTS RTYGGTGIGL SISKRLVELM QGEIGFVSKP GVGTTFSFTG
0801: VFGERERDSS VAALELFDQS IHEFQGLKAL VIDSRNIRAE VTRYHLQRVG VSSVDIASSL ATASTSCASK LVNLDLILID KDAWNKEEYV AFNSGQETST
0901: RPPKIVLLAT FTTPAELSEI KSSGLVDEVV MKPLRMSVLI CCLQETMGSG GKKRQTNRKP KNLGNLLRGK QILVVDDTMV NRRVADAVLR KYGALVTCVD
1001: SGKAAVAMLK PPHDFHACFM DLQMPEMDGF EATRRVRDLE EEMSNKEESR KWHTPILAMT ADVIQATNEK CIKCGMDGFV SKPFEEEELY SSVARFFDK

Best Arabidopsis Sequence Match ( AT5G35750.1 )
(BLAST)

0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC

Arabidopsis Description

AHK2Histidine kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U2]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.