Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX86641
CDY07498
CDY15498
CDY49629
CDY49633
CDY66567
CDY67999
CDY70681

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 CDX86641 AT1G04310.1 18577522
AT1G04310.1 CDY15498 AT1G04310.1 18577522
AT1G04310.1 CDY67999 AT1G04310.1 18577522
AT1G04310.1 CDY70681 AT1G04310.1 18577522
AT1G04310.1 CDY07498 AT1G66340.1 18577522
AT1G04310.1 CDY49629 AT1G66340.1 18577522
AT1G04310.1 CDY49633 AT1G66340.1 18577522
AT1G04310.1 CDY66567 AT1G66340.1 18577522
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015303.1-P Field mustard endoplasmic reticulum 98.06 98.54
CDY70681 Canola endoplasmic reticulum 96.93 97.24
CDX86641 Canola endoplasmic reticulum 79.48 82.69
AT1G04310.1 Thale cress endoplasmic reticulum 83.2 79.84
KRG90373 Soybean plasma membrane 43.94 59.52
KRH34517 Soybean plasma membrane 53.15 44.64
KRG92290 Soybean plasma membrane 54.6 44.36
HORVU6Hr1G080170.1 Barley plasma membrane 13.25 43.62
VIT_05s0049g00090.t01 Wine grape plasma membrane 53.63 43.46
CDY70443 Canola plasma membrane 52.34 41.54
CDY35503 Canola plasma membrane 52.18 41.46
Solyc06g053710.2.1 Tomato plasma membrane 49.6 40.34
PGSC0003DMT400041983 Potato plasma membrane 49.6 40.34
GSMUA_Achr11P... Banana plasma membrane 45.4 37.07
Zm00001d051889_P002 Maize endoplasmic reticulum 45.07 37.0
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 45.07 36.86
OQU85974 Sorghum plasma membrane 45.72 36.47
CDY30004 Canola plasma membrane 45.07 36.42
TraesCS6B01G439600.1 Wheat mitochondrion 45.56 35.97
TraesCS6D01G383600.1 Wheat mitochondrion 45.56 35.97
TraesCS2D01G000500.1 Wheat plasma membrane 44.26 35.31
TraesCS2B01G023800.1 Wheat plasma membrane 43.78 35.24
TraesCS2A01G000200.1 Wheat plasma membrane 44.1 35.09
Os04t0169100-02 Rice plasma membrane 43.13 34.99
EES10426 Sorghum plasma membrane 43.46 34.8
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 43.62 34.75
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 45.4 34.73
Zm00001d004372_P003 Maize plasma membrane 43.13 34.68
HORVU2Hr1G000030.1 Barley plasma membrane 42.97 34.32
PGSC0003DMT400044244 Potato plasma membrane 41.52 34.13
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 44.91 33.82
Solyc09g089610.2.1 Tomato endoplasmic reticulum 41.2 33.82
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 42.33 32.59
Os02t0820900-03 Rice mitochondrion 43.13 31.94
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 33.44 31.75
CDX80113 Canola plasma membrane 31.02 31.32
CDY63851 Canola plasma membrane 31.02 30.82
TraesCS6B01G314600.1 Wheat plasma membrane 35.86 30.45
TraesCS6D01G266200.1 Wheat plasma membrane 35.7 30.44
CDY15498 Canola plasma membrane 83.52 30.23
TraesCS6A01G285800.1 Wheat plasma membrane 35.38 30.08
HORVU6Hr1G071860.2 Barley plasma membrane 34.73 29.78
TraesCS6A01G329400.1 Wheat plasma membrane 35.06 29.73
TraesCS6D01G308300.1 Wheat plasma membrane 34.57 29.4
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 34.41 29.26
Os07t0259100-01 Rice mitochondrion, plasma membrane 35.22 28.06
CDY49633 Canola cytosol 33.12 27.89
CDY07498 Canola cytosol 33.12 27.85
EES06508 Sorghum mitochondrion, plasma membrane 34.57 25.88
Zm00001d053594_P001 Maize plasma membrane 32.79 25.28
HORVU6Hr1G080180.1 Barley cytosol 20.19 24.85
Zm00001d021687_P001 Maize plasma membrane 33.76 24.44
KXG36402 Sorghum plasma membrane 33.28 24.09
CDY21123 Canola cytosol 6.79 14.0
CDX90318 Canola cytosol 6.14 12.34
KRG90374 Soybean cytosol 4.04 11.16
CDX78398 Canola cytosol 10.82 10.67
CDX78397 Canola cytosol 6.46 10.39
CDY03101 Canola cytosol, peroxisome, plasma membrane 15.35 9.03
CDY17631 Canola cytosol, peroxisome, plasma membrane 15.35 9.03
CDY47297 Canola plasma membrane 16.64 8.96
CDX93074 Canola plasma membrane 15.67 8.84
CDY50037 Canola endoplasmic reticulum, golgi, plasma membrane 15.67 8.83
CDX74635 Canola cytosol, golgi, plasma membrane 16.32 8.79
CDX97049 Canola nucleus 12.6 8.71
CDX69808 Canola nucleus 12.6 8.69
CDY15717 Canola endoplasmic reticulum, golgi, plasma membrane 14.22 8.62
CDY03909 Canola endoplasmic reticulum, golgi, plasma membrane 13.89 8.59
CDY67688 Canola nucleus 12.44 8.45
CDY40112 Canola nucleus 12.44 8.41
CDY64702 Canola mitochondrion 1.62 7.63
CDY20843 Canola nucleus 11.95 6.2
CDY24380 Canola nucleus 11.95 6.2
CDX70367 Canola endoplasmic reticulum, golgi 12.28 5.54
CDY01193 Canola endoplasmic reticulum, golgi, plasma membrane 9.53 5.52
CDY12735 Canola endoplasmic reticulum, golgi, plasma membrane 9.37 5.45
CDY55381 Canola endoplasmic reticulum, plasma membrane, plastid 9.69 5.25
CDX80103 Canola endoplasmic reticulum, golgi, plasma membrane 9.37 5.21
CDY66567 Canola cytosol 0.65 2.74
CDY49629 Canola cytosol 0.32 1.44
CDY03106 Canola cytosol 0.0 0.0
CDY03102 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1GO:A0A078JMI7UniProt:A0A078JMI7EnsemblPlants:CDY67999ProteinID:CDY67999
ProteinID:CDY67999.1ncoils:CoilInterPro:GAFGO:GO:0000155GO:GO:0000160GO:GO:0003674
GO:GO:0003824GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0023014GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00068403001InterPro:HisK_dim/PPFAM:PF01590PANTHER:PTHR43719
PANTHER:PTHR43719:SF6SMART:SM00065SUPFAM:SSF55781SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EE4D25
SEG:seg:::::
Description
BnaAnng25820DBnaAnng25820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMI7]
Coordinates
chrLK036744:+:3723..5799
Molecular Weight (calculated)
68531.4 Da
IEP (calculated)
8.129
GRAVY (calculated)
0.100
Length
619 amino acids
Sequence
(BLAST)
001: MLKTLLVHVL LFFFFLTASV AGSLSICNCD DEDSFFTFEA ILQSQKAGDF LIAVAYFSIP IELLYFVSRT NVPSPYNWVV CEFIAFIVLC GMTHLLAGFT
101: YGPHWAWVTT AVTVFKMLTG IVSFLTAISL VTLLPLLLKA KVREFMLSKK TRELGREVGI IMKQTETSLH VRMLTSKIRT SLDRHTILYT TLVELSKTLG
201: LKNCAVWIPN EIKTEMNLTH ELRPGHQDDN AGGGRGGYGG GFSIPITESD VVRIKRSEEV NMLNSGSALA SVTSRGKPDG QTVGIRVPML RVCNFKGGTP
301: EAIHMCYAIL VCVLPSRSWT YQELEIVKVV ADQVAVAISH AVILEESQLM REKLAEQNRA LQVARENALR ANQAKAAFEE MMGDAMRRPV RSILGLLPVI
401: ARDGGLQENQ KVIVDAMGRT SELLLHLVSN AGDITRPGET HCFSLRSVAK ETACLARCFC VGNGFGFSTE VDRSLPDYVV GDARKVFQVV LHMLGGLVNR
501: KIKGNVTFLV SPESSEVDSQ EAVWRQCYSK EYIKVKFGFE VETSSVPSFN SSEDIVKLMQ GNIRVVEDGS GLVKSLSVVF RFQLRRSILS QGGGYSGETF
601: KTATPPSTSH DHWRQEEIR
Best Arabidopsis Sequence Match ( AT1G04310.2 )
(BLAST)
001: MLKTLLVQWL VFFFFFLIGS VVTAAEDDGS LSLCNCDDED SLFSYETILN SQKVGDFLIA IAYFSIPIEL VYFVSRTNVP SPYNWVVCEF IAFIVLCGMT
101: HLLAGFTYGP HWPWVMTAVT VFKMLTGIVS FLTALSLVTL LPLLLKAKVR EFMLSKKTRE LDREVGIIMK QTETSLHVRM LTTKIRTSLD RHTILYTTLV
201: ELSKTLGLKN CAVWIPNEIK TEMNLTHELR PRIDDENENE HFGGYAGFSI PISESDVVRI KRSEEVNMLS PGSVLASVTS RGKSGPTVGI RVPMLRVCNF
301: KGGTPEAIHM CYAILVCVLP LRQPQAWTYQ ELEIVKVVAD QVAVAISHAV ILEESQLMRE KLAEQNRALQ VARENALRAN QAKAAFEQMM SDAMRCPVRS
401: ILGLLPLILQ DGKLPENQTV IVDAMRRTSE LLVQLVNNAG DINNGTIRAA ETHYFSLHSV VKESACVARC LCMANGFGFS AEVYRALPDY VVGDDRKVFQ
501: AILHMLGVLM NRKIKGNVTF WVFPESGNSD VSERKDIQEA VWRHCYSKEY MEVRFGFEVT AEGEESSSSS SGSNLEEEEE NPSLNACQNI VKYMQGNIRV
601: VEDGLGLVKS VSVVFRFQLR RSMMSRGGGY SGETFRTSTP PSTSH
Arabidopsis Description
ERS2Ethylene response sensor 2 [Source:UniProtKB/Swiss-Prot;Acc:P93825]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.