CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028573.1-P	Field mustard	nucleus	98.35	98.35
CDY40112	Canola	nucleus	95.06	94.54
CDX69808	Canola	nucleus	89.68	90.98
CDX97049	Canola	nucleus	89.13	90.62
CDX78398	Canola	cytosol	60.81	88.22
Os06t0654300-00	Rice	cytosol, mitochondrion, plastid	12.18	87.4
AT5G10720.1	Thale cress	nucleus	87.49	86.44
CDX78397	Canola	cytosol	35.57	84.16
CDX90318	Canola	cytosol	21.95	64.94
CDX70367	Canola	endoplasmic reticulum, golgi	89.13	59.18
GSMUA_Achr1P23390_001	Banana	cytosol	54.88	57.21
Zm00001d036704_P002	Maize	nucleus	51.7	48.81
TraesCS2A01G472800.2	Wheat	nucleus	32.16	48.75
OQU76804	Sorghum	nucleus	51.15	48.59
TraesCS7D01G485500.1	Wheat	nucleus	51.26	48.19
TraesCS7A01G498200.2	Wheat	nucleus	51.15	48.14
TraesCS7B01G405100.1	Wheat	nucleus	51.04	47.99
TraesCS2B01G495500.1	Wheat	nucleus	31.94	47.94
Zm00001d046928_P002	Maize	nucleus	51.26	47.85
HORVU2Hr1G106760.1	Barley	cytosol	32.82	47.84
TraesCS2D01G472500.1	Wheat	cytosol	28.32	44.87
CDY03102	Canola	cytosol	2.09	26.39
CDY64702	Canola	mitochondrion	3.62	25.19
CDY03106	Canola	cytosol	1.98	25.0
CDY66567	Canola	cytosol	3.62	22.6
CDY49629	Canola	cytosol	3.4	22.3
CDY21123	Canola	cytosol	6.92	21.0
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	22.28	19.88
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	21.84	19.88
CDY49633	Canola	cytosol	16.03	19.86
CDY07498	Canola	cytosol	16.03	19.84
CDX80113	Canola	plasma membrane	12.29	18.27
CDY03101	Canola	cytosol, peroxisome, plasma membrane	20.97	18.16
CDY17631	Canola	cytosol, peroxisome, plasma membrane	20.97	18.16
CDY63851	Canola	plasma membrane	12.18	17.82
CDX93074	Canola	plasma membrane	20.09	16.68
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	19.98	16.56
CDX74635	Canola	cytosol, golgi, plasma membrane	20.31	16.1
CDY30004	Canola	plasma membrane	13.5	16.06
CDY47297	Canola	plasma membrane	20.2	16.01
CDY70443	Canola	plasma membrane	13.17	15.38
CDY35503	Canola	plasma membrane	13.06	15.28
CDY20843	Canola	nucleus	18.0	13.75
CDY24380	Canola	nucleus	18.0	13.74
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	16.03	13.71
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	16.03	13.67
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	16.58	13.57
CDX86641	Canola	endoplasmic reticulum	8.78	13.45
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	16.79	13.4
CDY67999	Canola	plasma membrane	8.45	12.44
CDY70681	Canola	endoplasmic reticulum	8.34	12.32
CDY15498	Canola	plasma membrane	11.86	6.32

Protein Annotations

Gene3D:1.10.287.130	Gene3D:3.30.450.20	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:A0A078JJE6
UniProt:A0A078JJE6	EnsemblPlants:CDY67688	ProteinID:CDY67688	ProteinID:CDY67688.1	InterPro:CheY-like_superfamily	ncoils:Coil
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772
GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00065998001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890
PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110
PANTHER:PTHR43047	PANTHER:PTHR43047:SF5	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0004EE109C	SEG:seg

Description

BnaAnng24980DBnaAnng24980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJE6]

Coordinates

chrLK036395:+:3051..6738

Molecular Weight (calculated)

102501.0 Da

IEP (calculated)

4.870

GRAVY (calculated)

-0.478

Length

911 amino acids

Sequence
(BLAST)

001: MVCEMETDHQ TEEMDVEVLS SMWPEDVGGT EPDNQFNVEK PAGDSDTLKE VDIAEKRTMA DLKRLPDLLD TTDQGSSQLT NLVKQWEYMQ DHAVRLLREE
101: LKILTKQREE AEAKELKIIE EHNFESEEPE NVPVLDESSD LFRRFKEKKR DKLVGRKRIE IDEEFDTVAY WKQKALSLEK MLEASTERER RLIKKLNESL
201: KTMESHSAPV EELTQNLKRA EGFLHFILQN APIVMGHQDK DLRYLFIYNK FPTLREHDIL GKTDVEIFHG GGVKESEDFK REVLEKGKAS KREITFETDL
301: FGSKTFLIYV EPVYNKAREK IGINYMGMEV TDQVRKREKM AKLREDNAVR KAMESELTKT IHITEETMRA KQMLATMSHE IRSPLSGVVG MAEILSTTKL
401: DKEQRQLLNV MISSGDLVLQ LINDILDLSK VESGVMKLEA TKFRPREVVK HVLQTAAASL KKELTLEGNI ADEVPILVVG DVLRIRQILT NLISNAIKFT
501: HQGKVGIKLK VIPEPSFANG LELNADAEEQ NGLTETETSV WIRCDVYDTG IGIPENALPC LFKKYMQASA DHARKYGGTG LGLAICKQLV ELMGGQLTVT
601: SQVDLGSTFT FILPYKVATS NDHSDDQDEF SDMVDHQPEP DDSTEGYFQF KPLLGSIYSN GGPVIGNNFL PHKVMLPSPV KLINGQSEAV QVENGGCMDG
701: PRHETRSGHC PESAHQYENG NGPCHSKESE SCSSSQASSE MESEFTVSSP REEEKAETVV KETSKQPKIL LVEDNKINIM VAKSMMKQLG YTFDIANNGV
801: EAVTAINGSS YDLVLMDVCM PVLDGLKATR LIRSYEQSGN WDAAVEAGVD IKTLEDKQLC VRSTNRLPII AMTANTLSES SEECYANGMD SFISKPVTLQ
901: KLKECLKQYL H

Best Arabidopsis Sequence Match ( AT5G10720.1 )
(BLAST)

001: MVCEMETDQI EEMDVEVLSS MWPEDVGTEA DKQFNVEKPA GDLDTLKEVT IETRTIADMT RLPNLLNSTH QGSSQLTNLV KQWEYMQDNA VRLLKEELKN
101: LDRQREEAEA KELKIIEEYK FESNEPENVP VLDETSDLFR RFRQKKRDAL VDSKKIEIYE EFDTVAYWKQ KALSLEKMLE ASTERERRLM EKLSESLKTM
201: ESQSAPVQEL TQNLKRAEGF LHFILQNAPI VMGHQDKDLR YLFIYNKYPS LREQDILGKT DVEIFHGGGV KESEDFKREV LEKGKASKRE ITFTTDLFGS
301: KTFLIYVEPV YNKAGEKIGI NYMGMEVTDQ VVKREKMAKL REDNAVRKAM ESELNKTIHI TEETMRAKQM LATMSHEIRS PLSGVVGMAE ILSTTKLDKE
401: QRQLLNVMIS SGDLVLQLIN DILDLSKVES GVMRLEATKF RPREVVKHVL QTAAASLKKS LTLEGNIADD VPIEVVGDVL RIRQILTNLI SNAIKFTHEG
501: NVGIKLQVIS EPSFVRDNAL NADTEEHEQN GLTETSVWIC CDVWDTGIGI PENALPCLFK KYMQASADHA RKYGGTGLGL AICKQLVELM GGQLTVTSRV
601: SEGSTFTFIL PYKVGRSDDY SDDQDEFSDM ADQQSEPDDT AEGYFQFKPL LGSIYSNGGP GISNDFLPHK VMLTSPIKLI NGFVADPSNN TGQSEMLQLE
701: NGGYMDESKL ETSSGHCPES AHQYENGNGR CFSKESESCS SSQASSEGGT LEMESELTVS SHREEEKAET EVKETSKPKI LLVEDNKINI MVAKSMMKQL
801: GHTMDIANNG VEAITAINSS SYDLVLMDVC MPVLDGLKAT RLIRSYEETG NWNAAIEAGV DISTSENEQV CMRPTNRLPI IAMTANTLAE SSEECYANGM
901: DSFISKPVTL QKLRECLQQY LH

Arabidopsis Description

AHK5Histidine kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3S4A7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.