Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67999 | Canola | plasma membrane | 82.69 | 79.48 |
| CDY70681 | Canola | endoplasmic reticulum | 81.85 | 78.93 |
| AT1G04310.1 | Thale cress | endoplasmic reticulum | 81.18 | 74.88 |
| KRG90373 | Soybean | plasma membrane | 44.03 | 57.33 |
| KRH34517 | Soybean | plasma membrane | 53.61 | 43.28 |
| HORVU6Hr1G080170.1 | Barley | plasma membrane | 13.61 | 43.09 |
| KRG92290 | Soybean | plasma membrane | 55.13 | 43.04 |
| CDY70443 | Canola | plasma membrane | 54.79 | 41.79 |
| VIT_05s0049g00090.t01 | Wine grape | plasma membrane | 53.45 | 41.62 |
| CDY35503 | Canola | plasma membrane | 54.29 | 41.46 |
| PGSC0003DMT400041983 | Potato | plasma membrane | 49.24 | 38.5 |
| Solyc06g053710.2.1 | Tomato | plasma membrane | 49.08 | 38.37 |
| CDY30004 | Canola | plasma membrane | 45.88 | 35.64 |
| GSMUA_Achr8P14350_001 | Banana | endoplasmic reticulum | 45.04 | 35.4 |
| Zm00001d051889_P002 | Maize | endoplasmic reticulum | 44.71 | 35.28 |
| GSMUA_Achr11P... | Banana | plasma membrane | 44.87 | 35.22 |
| OQU85974 | Sorghum | plasma membrane | 45.04 | 34.54 |
| TraesCS6B01G439600.1 | Wheat | mitochondrion | 44.87 | 34.06 |
| TraesCS6D01G383600.1 | Wheat | mitochondrion | 44.71 | 33.93 |
| CDY15498 | Canola | plasma membrane | 96.97 | 33.74 |
| Os04t0169100-02 | Rice | plasma membrane | 43.19 | 33.68 |
| TraesCS2B01G023800.1 | Wheat | plasma membrane | 42.86 | 33.16 |
| TraesCS6A01G399400.2 | Wheat | mitochondrion, plasma membrane | 45.04 | 33.13 |
| TraesCS2D01G000500.1 | Wheat | plasma membrane | 43.19 | 33.12 |
| EES10426 | Sorghum | plasma membrane | 42.86 | 32.99 |
| TraesCS2A01G000200.1 | Wheat | plasma membrane | 43.03 | 32.9 |
| Zm00001d004372_P003 | Maize | plasma membrane | 42.52 | 32.86 |
| HORVU0Hr1G001750.2 | Barley | endoplasmic reticulum | 42.86 | 32.82 |
| HORVU2Hr1G000030.1 | Barley | plasma membrane | 42.35 | 32.52 |
| HORVU6Hr1G091700.6 | Barley | cytosol, mitochondrion, plasma membrane | 44.37 | 32.12 |
| PGSC0003DMT400044244 | Potato | plasma membrane | 40.5 | 32.01 |
| Solyc09g089610.2.1 | Tomato | endoplasmic reticulum | 40.5 | 31.96 |
| Zm00001d025050_P001 | Maize | cytosol, golgi, plasma membrane | 42.18 | 31.22 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 34.12 | 31.14 |
| Os02t0820900-03 | Rice | mitochondrion | 43.03 | 30.62 |
| CDX80113 | Canola | plasma membrane | 30.59 | 29.69 |
| CDY63851 | Canola | plasma membrane | 30.59 | 29.21 |
| TraesCS6A01G329400.1 | Wheat | plasma membrane | 35.63 | 29.04 |
| TraesCS6D01G308300.1 | Wheat | plasma membrane | 35.29 | 28.85 |
| TraesCS6D01G266200.1 | Wheat | plasma membrane | 34.96 | 28.65 |
| TraesCS6B01G314600.1 | Wheat | plasma membrane | 34.96 | 28.53 |
| TraesCS6A01G285800.1 | Wheat | plasma membrane | 34.79 | 28.43 |
| TraesCS6B01G360200.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 34.79 | 28.43 |
| HORVU6Hr1G071860.2 | Barley | plasma membrane | 33.95 | 27.98 |
| CDY07498 | Canola | cytosol | 33.28 | 26.9 |
| Os07t0259100-01 | Rice | mitochondrion, plasma membrane | 35.13 | 26.9 |
| CDY49633 | Canola | cytosol | 33.11 | 26.8 |
| HORVU6Hr1G080180.1 | Barley | cytosol | 20.5 | 24.25 |
| EES06508 | Sorghum | mitochondrion, plasma membrane | 33.28 | 23.94 |
| Zm00001d053594_P001 | Maize | plasma membrane | 31.76 | 23.54 |
| Zm00001d021687_P001 | Maize | plasma membrane | 33.61 | 23.39 |
| KXG36402 | Sorghum | plasma membrane | 33.45 | 23.27 |
| CDY21123 | Canola | cytosol | 7.06 | 14.0 |
| CDX90318 | Canola | cytosol | 6.72 | 12.99 |
| CDX78398 | Canola | cytosol | 11.93 | 11.31 |
| CDX78397 | Canola | cytosol | 6.89 | 10.65 |
| KRG90374 | Soybean | cytosol | 3.7 | 9.82 |
| CDY64702 | Canola | mitochondrion | 2.02 | 9.16 |
| CDX97049 | Canola | nucleus | 13.78 | 9.15 |
| CDX69808 | Canola | nucleus | 13.78 | 9.13 |
| CDY67688 | Canola | nucleus | 13.45 | 8.78 |
| CDY03101 | Canola | cytosol, peroxisome, plasma membrane | 15.46 | 8.75 |
| CDY17631 | Canola | cytosol, peroxisome, plasma membrane | 15.46 | 8.75 |
| CDY40112 | Canola | nucleus | 13.45 | 8.73 |
| CDX93074 | Canola | plasma membrane | 15.46 | 8.39 |
| CDY50037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 15.46 | 8.37 |
| CDY47297 | Canola | plasma membrane | 15.97 | 8.27 |
| CDY15717 | Canola | endoplasmic reticulum, golgi, plasma membrane | 14.12 | 8.23 |
| CDY03909 | Canola | endoplasmic reticulum, golgi, plasma membrane | 13.78 | 8.19 |
| CDX74635 | Canola | cytosol, golgi, plasma membrane | 15.63 | 8.09 |
| CDY20843 | Canola | nucleus | 11.43 | 5.7 |
| CDY24380 | Canola | nucleus | 11.43 | 5.7 |
| CDX70367 | Canola | endoplasmic reticulum, golgi | 13.11 | 5.69 |
| CDY01193 | Canola | endoplasmic reticulum, golgi, plasma membrane | 9.92 | 5.52 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 9.75 | 5.45 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 9.58 | 4.99 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 9.24 | 4.94 |
| CDY66567 | Canola | cytosol | 0.5 | 2.05 |
| CDY49629 | Canola | cytosol | 0.17 | 0.72 |
| CDY03102 | Canola | cytosol | 0.0 | 0.0 |
| CDY03106 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86641 | EnsemblPlantsGene:GSBRNA2T00145307001 | Gene3D:1.10.287.130 | GO:A0A078DBK0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GAF | ncoils:Coil | PANTHER:PTHR43719 | PANTHER:PTHR43719:SF6 | PFAM:PF01590 |
| ProteinID:CDX86641 | ProteinID:CDX86641.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55781 | TMHMM:TMhelix |
| UniParc:UPI0004EE8DCD | MapMan:11.5.2.1 | : | : | : | : |
Description
BnaC08g00620D
Coordinates
chrLK031846:+:1297455..1299868
Molecular Weight (calculated)
65830.4 Da
IEP (calculated)
7.804
GRAVY (calculated)
0.139
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLNTLLVHG LLLIFFFIIG SVAGEDNDGG LSICNCDDED SYFSYEGILE SQKVGDFLIA VAYFSIPIEL LYFVSRTNVS SPYIWVVCEF IAFIVLCGMS
101: HLLSGFTYGP HYPWVMTAAT VFKMLTAIVS FLTAISLVTL LPLLLKAKVR EFMLSKKTRE LNREVGLIMK QTETSLHVRM LTTKIRTSLD RHTILYTTLV
201: ELSKTLGLKN CAVWIPNEIK TEMNLTHELN GENRSVEVNM LSAGSALASV TTRGKTGQTV GIRVPMLRVC NFKGGTPEAI HMCYAILVCV LPLRRSWSYQ
301: ELEIVKVVAD QVAVAISHAV ILEESQLMRE KLTEQNRALQ VARENAMRAN QAKAAFEEMM GDAMRRPVRS ILELLPLITQ DGVSLPETQK VIVDAMGRTS
401: ELLLHLVNNA GDVTSGTHCF SLRSVVKETA CLARCLCLGN GFGFSTDVDR ALPDCVMGDA RKVLQVVLHM LGGVMNRKIK GNVSFKVVPE RGSSEVVKES
501: QEAAWRQCYS KEYVEVKFGF DVAAEGEESS SSSSSTKFMQ GNVLVVEDSQ GLVKSLSVVF RFQLRRSIVS RGGGYSGETF KTSTPPSTSN GHWRQ
101: HLLSGFTYGP HYPWVMTAAT VFKMLTAIVS FLTAISLVTL LPLLLKAKVR EFMLSKKTRE LNREVGLIMK QTETSLHVRM LTTKIRTSLD RHTILYTTLV
201: ELSKTLGLKN CAVWIPNEIK TEMNLTHELN GENRSVEVNM LSAGSALASV TTRGKTGQTV GIRVPMLRVC NFKGGTPEAI HMCYAILVCV LPLRRSWSYQ
301: ELEIVKVVAD QVAVAISHAV ILEESQLMRE KLTEQNRALQ VARENAMRAN QAKAAFEEMM GDAMRRPVRS ILELLPLITQ DGVSLPETQK VIVDAMGRTS
401: ELLLHLVNNA GDVTSGTHCF SLRSVVKETA CLARCLCLGN GFGFSTDVDR ALPDCVMGDA RKVLQVVLHM LGGVMNRKIK GNVSFKVVPE RGSSEVVKES
501: QEAAWRQCYS KEYVEVKFGF DVAAEGEESS SSSSSTKFMQ GNVLVVEDSQ GLVKSLSVVF RFQLRRSIVS RGGGYSGETF KTSTPPSTSN GHWRQ
001: MLKTLLVQWL VFFFFFLIGS VVTAAEDDGS LSLCNCDDED SLFSYETILN SQKVGDFLIA IAYFSIPIEL VYFVSRTNVP SPYNWVVCEF IAFIVLCGMT
101: HLLAGFTYGP HWPWVMTAVT VFKMLTGIVS FLTALSLVTL LPLLLKAKVR EFMLSKKTRE LDREVGIIMK QTETSLHVRM LTTKIRTSLD RHTILYTTLV
201: ELSKTLGLKN CAVWIPNEIK TEMNLTHELR PRIDDENENE HFGGYAGFSI PISESDVVRI KRSEEVNMLS PGSVLASVTS RGKSGPTVGI RVPMLRVCNF
301: KGGTPEAIHM CYAILVCVLP LRQPQAWTYQ ELEIVKVVAD QVAVAISHAV ILEESQLMRE KLAEQNRALQ VARENALRAN QAKAAFEQMM SDAMRCPVRS
401: ILGLLPLILQ DGKLPENQTV IVDAMRRTSE LLVQLVNNAG DINNGTIRAA ETHYFSLHSV VKESACVARC LCMANGFGFS AEVYRALPDY VVGDDRKVFQ
501: AILHMLGVLM NRKIKGNVTF WVFPESGNSD VSERKDIQEA VWRHCYSKEY MEVRFGFEVT AEGEESSSSS SGSNLEEEEE NPSLNACQNI VKYMQGNIRV
601: VEDGLGLVKS VSVVFRFQLR RSMMSRGGGY SGETFRTSTP PSTSH
101: HLLAGFTYGP HWPWVMTAVT VFKMLTGIVS FLTALSLVTL LPLLLKAKVR EFMLSKKTRE LDREVGIIMK QTETSLHVRM LTTKIRTSLD RHTILYTTLV
201: ELSKTLGLKN CAVWIPNEIK TEMNLTHELR PRIDDENENE HFGGYAGFSI PISESDVVRI KRSEEVNMLS PGSVLASVTS RGKSGPTVGI RVPMLRVCNF
301: KGGTPEAIHM CYAILVCVLP LRQPQAWTYQ ELEIVKVVAD QVAVAISHAV ILEESQLMRE KLAEQNRALQ VARENALRAN QAKAAFEQMM SDAMRCPVRS
401: ILGLLPLILQ DGKLPENQTV IVDAMRRTSE LLVQLVNNAG DINNGTIRAA ETHYFSLHSV VKESACVARC LCMANGFGFS AEVYRALPDY VVGDDRKVFQ
501: AILHMLGVLM NRKIKGNVTF WVFPESGNSD VSERKDIQEA VWRHCYSKEY MEVRFGFEVT AEGEESSSSS SGSNLEEEEE NPSLNACQNI VKYMQGNIRV
601: VEDGLGLVKS VSVVFRFQLR RSMMSRGGGY SGETFRTSTP PSTSH
Arabidopsis Description
ERS2Ethylene response sensor 2 [Source:UniProtKB/Swiss-Prot;Acc:P93825]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.