CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70289
CDX70318
CDX80113
CDX80884
CDX85268
CDX86370
CDX86641
CDY00096
CDY07498
CDY10360
CDY10393
CDY11267
CDY15498
CDY19286
CDY19992
CDY21123
CDY30004
CDY35503
CDY37282
CDY49629
CDY49633
CDY63851
CDY64702
CDY66567
CDY67999
CDY70443
CDY70681

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G66340.1	CDX86641	AT1G04310.1	18577522
AT1G66340.1	CDY15498	AT1G04310.1	18577522
AT1G66340.1	CDY67999	AT1G04310.1	18577522
AT1G66340.1	CDY70681	AT1G04310.1	18577522
AT1G66340.1	CDY07498	AT1G66340.1	18384742
AT1G66340.1	CDY49629	AT1G66340.1	18384742
AT1G66340.1	CDY49633	AT1G66340.1	18384742
AT1G66340.1	CDY66567	AT1G66340.1	18384742
AT1G66340.1	CDY07498	AT1G66340.1	18577522
AT1G66340.1	CDY49629	AT1G66340.1	18577522
AT1G66340.1	CDY49633	AT1G66340.1	18577522
AT1G66340.1	CDY66567	AT1G66340.1	18577522
AT1G66340.1	CDX80113	AT2G40940.1	18577522
AT1G66340.1	CDY63851	AT2G40940.1	18577522
AT1G66340.1	CDY21123	AT3G04580.1	18577522
AT1G66340.1	CDY30004	AT3G04580.1	18577522
AT1G66340.1	CDY64702	AT3G04580.1	18577522
AT1G66340.1	CDY19286	AT3G21510.1	10930573
AT1G66340.1	CDY37282	AT3G21510.1	10930573
AT1G66340.1	CDY19286	AT3G21510.1	18384742
AT1G66340.1	CDY37282	AT3G21510.1	18384742
AT1G66340.1	CDY35503	AT3G23150.1	18577522
AT1G66340.1	CDY70443	AT3G23150.1	18577522
AT1G66340.1	CDX85268	AT3G29350.1	10930573
AT1G66340.1	CDX86370	AT3G29350.1	10930573
AT1G66340.1	CDY00096	AT3G29350.1	10930573
AT1G66340.1	CDY19992	AT3G29350.1	10930573
AT1G66340.1	CDX70318	AT5G03280.1	19769567
AT1G66340.1	CDY10393	AT5G03280.1	19769567
AT1G66340.1	CDX70289	AT5G03730.1	12837948
AT1G66340.1	CDX80884	AT5G03730.1	12837948
AT1G66340.1	CDY10360	AT5G03730.1	12837948
AT1G66340.1	CDY11267	AT5G03730.1	12837948
AT1G66340.1	CDX70289	AT5G03730.1	8417317
AT1G66340.1	CDX80884	AT5G03730.1	8417317
AT1G66340.1	CDY10360	AT5G03730.1	8417317
AT1G66340.1	CDY11267	AT5G03730.1	8417317
AT1G66340.1	CDX70289	AT5G03730.1	9560288
AT1G66340.1	CDX80884	AT5G03730.1	9560288
AT1G66340.1	CDY10360	AT5G03730.1	9560288
AT1G66340.1	CDY11267	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49629	Canola	cytosol	89.73	94.24
CDY64702	Canola	mitochondrion	21.92	24.43
CDY49633	Canola	cytosol	87.67	17.41
CDY07498	Canola	cytosol	86.3	17.12
AT1G66340.1	Thale cress	plasma membrane	82.88	16.4
CDY21123	Canola	cytosol	32.88	16.0
CDY03106	Canola	cytosol	7.53	15.28
CDY03102	Canola	cytosol	7.53	15.28
KRH27542	Soybean	cytosol	63.01	12.45
KRH36433	Soybean	cytosol	61.64	12.16
VIT_19s0093g00580.t01	Wine grape	cytosol	59.59	11.74
PGSC0003DMT400020285	Potato	endoplasmic reticulum, plasma membrane, plastid	60.27	11.67
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	59.59	11.54
PGSC0003DMT400071109	Potato	cytosol, endoplasmic reticulum, plasma membrane	54.79	10.87
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	52.05	10.33
CDY30004	Canola	plasma membrane	33.56	6.4
CDY35503	Canola	plasma membrane	31.51	5.91
CDY70443	Canola	plasma membrane	31.51	5.9
CDX97049	Canola	nucleus	23.97	3.91
CDX69808	Canola	nucleus	23.97	3.9
CDY67688	Canola	nucleus	22.6	3.62
CDY40112	Canola	nucleus	22.6	3.6
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	21.92	3.2
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	21.92	3.13
CDY17631	Canola	cytosol, peroxisome, plasma membrane	21.23	2.95
CDY03101	Canola	cytosol, peroxisome, plasma membrane	21.23	2.95
CDX74635	Canola	cytosol, golgi, plasma membrane	21.23	2.7
CDY47297	Canola	plasma membrane	21.23	2.7
CDX93074	Canola	plasma membrane	19.86	2.64
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	19.86	2.64
CDY20843	Canola	nucleus	20.55	2.51
CDY24380	Canola	nucleus	20.55	2.51
CDX70367	Canola	endoplasmic reticulum, golgi	22.6	2.41
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	18.49	2.36
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	17.12	2.35
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	16.44	2.25
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	17.12	2.25
CDX80113	Canola	plasma membrane	5.48	1.31
CDY15498	Canola	plasma membrane	15.07	1.29
CDY63851	Canola	plasma membrane	5.48	1.28
CDX78398	Canola	cytosol	3.42	0.8
CDY70681	Canola	endoplasmic reticulum	2.74	0.65
CDY67999	Canola	plasma membrane	2.74	0.65
CDX86641	Canola	endoplasmic reticulum	2.05	0.5
CDX90318	Canola	cytosol	0.68	0.32
CDX78397	Canola	cytosol	0.68	0.26

Protein Annotations

Gene3D:3.40.50.2300	MapMan:50.2.7	GO:A0A078JMG0	UniProt:A0A078JMG0	EnsemblPlants:CDY66567	ProteinID:CDY66567
ProteinID:CDY66567.1	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00054572001	InterPro:IPR001789
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR24423	PANTHER:PTHR24423:SF598	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0004EDFE94	:	:	:	:

Description

BnaCnng51460DBnaCnng51460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMG0]

Coordinates

chrLK035333:-:13117..13935

Molecular Weight (calculated)

16726.5 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.071

Length

146 amino acids

Sequence
(BLAST)

001: MIEFDPLYIN PNFSIQYSLK ARFMVENGVS RMLTKGLLVH LGCEVTTVSS NEECLRVVSH EHRVVFMDVC TPGVENYQIA LRIHEKFTKR HRRPLLVALT
101: GNTDKSTKEK CMSFGLDGVL LKPVSLDNMR NVLSDLLEHR VLYEAM

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.