Factsheet for VIT_19s0093g00580.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
endoplasmic reticulum 2
extracellular 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g02210.t01
VIT_05s0049g00090.t01
VIT_07s0005g00850.t01
VIT_07s0104g00880.t01
VIT_08s0007g03910.t01
VIT_08s0040g01730.t01
VIT_14s0081g00630.t01
VIT_19s0093g00580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G66340.1	VIT_05s0049g00090.t01	AT1G04310.1	18577522
AT1G66340.1	VIT_19s0093g00580.t01	AT1G66340.1	18384742
AT1G66340.1	VIT_19s0093g00580.t01	AT1G66340.1	18577522
AT1G66340.1	VIT_07s0005g00850.t01	AT2G40940.1	18577522
AT1G66340.1	VIT_14s0081g00630.t01	AT3G04580.1	18577522
AT1G66340.1	VIT_05s0020g02210.t01	AT3G21510.1	10930573
AT1G66340.1	VIT_05s0020g02210.t01	AT3G21510.1	18384742
AT1G66340.1	VIT_05s0049g00090.t01	AT3G23150.1	18577522
AT1G66340.1	VIT_07s0104g00880.t01	AT3G29350.1	10930573
AT1G66340.1	VIT_08s0040g01730.t01	AT5G03280.1	19769567
AT1G66340.1	VIT_08s0007g03910.t01	AT5G03730.1	12837948
AT1G66340.1	VIT_08s0007g03910.t01	AT5G03730.1	8417317
AT1G66340.1	VIT_08s0007g03910.t01	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36433	Soybean	cytosol	84.62	84.73
KRH27542	Soybean	cytosol	84.48	84.71
CDY07498	Canola	cytosol	82.73	83.29
CDY49633	Canola	cytosol	82.59	83.27
Bra004160.1-P	Field mustard	cytosol	82.59	83.15
AT1G66340.1	Thale cress	plasma membrane	82.59	82.93
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	83.54	82.1
PGSC0003DMT400020285	Potato	endoplasmic reticulum, plasma membrane, plastid	83.13	81.7
PGSC0003DMT400071109	Potato	cytosol, endoplasmic reticulum, plasma membrane	80.84	81.39
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	78.81	79.35
VIT_07s0005g00850.t01	Wine grape	cytosol	62.89	73.27
CDY49629	Canola	cytosol	11.88	63.31
CDY66567	Canola	cytosol	11.74	59.59
VIT_05s0049g00090.t01	Wine grape	plasma membrane	40.08	38.87
VIT_14s0081g00630.t01	Wine grape	plasma membrane	38.6	37.63
VIT_06s0004g05240.t01	Wine grape	endoplasmic reticulum, plasma membrane	24.43	32.85
VIT_01s0011g06190.t01	Wine grape	mitochondrion	23.35	16.49
VIT_04s0069g00750.t01	Wine grape	nucleus	18.62	16.31
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	22.67	16.17
VIT_12s0057g00690.t01	Wine grape	endoplasmic reticulum, golgi	22.54	13.13
VIT_04s0023g03680.t01	Wine grape	mitochondrion	18.22	10.93
VIT_07s0005g01380.t01	Wine grape	plasma membrane	15.92	10.79
VIT_04s0008g03460.t01	Wine grape	plastid	4.86	10.71

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:100232863	wikigene:100232863	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10
Gene3D:3.40.50.2300	ProteinID:AAF63755	ProteinID:AAF63755.1	EMBL:AF243474	EMBL:AM488716	ProteinID:CAN73257
ProteinID:CAN73257.1	ProteinID:CCB57199	ProteinID:CCB57199.1	InterPro:CheY-like_superfamily	InterPro:ETR	EntrezGene:ETR1
wikigene:ETR1	EMBL:FN596009	InterPro:GAF	InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160
GO:GO:0000166	GO:GO:0002237	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006464	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408
GO:GO:0009605	GO:GO:0009607	GO:GO:0009625	GO:GO:0009628	GO:GO:0009651	GO:GO:0009690
GO:GO:0009719	GO:GO:0009723	GO:GO:0009727	GO:GO:0009733	GO:GO:0009737	GO:GO:0009739
GO:GO:0009791	GO:GO:0009873	GO:GO:0009987	GO:GO:0010087	GO:GO:0010105	GO:GO:0010119
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0038199
GO:GO:0042742	GO:GO:0042802	GO:GO:0046872	GO:GO:0050665	GO:GO:0050896	GO:GO:0051301
GO:GO:0051740	GO:GO:0052544	GO:GO:0071281	GO:GO:1900140	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR029016
InterPro:IPR036890	RefSeq:NP_001268102.1	PFAM:PF00072	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518
PIRSF:PIRSF026389	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR24423	PANTHER:PTHR24423:SF598
UniProt:Q9M506	SMART:SM00065	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55781	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TIGR:TC56593
TMHMM:TMhelix	UniParc:UPI00000A90CC	ArrayExpress:VIT_19s0093g00580	EnsemblPlantsGene:VIT_19s0093g00580	EnsemblPlants:VIT_19s0093g00580.t01	unigene:Vvi.85
SEG:seg	:	:	:	:	:

Description

Ethylene receptor [Source:UniProtKB/TrEMBL;Acc:Q9M506]

Coordinates

chr19:+:17732082..17757417

Molecular Weight (calculated)

82832.4 Da

IEP (calculated)

6.898

GRAVY (calculated)

0.148

Length

741 amino acids

Sequence
(BLAST)

001: MESCDCIDPP WPGDELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFGMHS RNVEVVMTTA KVLTAVVSCV
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLIEL GRTLSLEECA LWMPTRTGLE LQLSYTLRQQ
201: NPVGFTIPIQ HPVINQVFSS NRAVKISPNC PVARLRPLAG KYMPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA VRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVEAILKSSS LLATLINDVL
401: DLSRLEDGSL QLENGTFNLH ALFREVLYLI KPIASVKKLF VSSSLAPDLP EFAVGDEKRL MQIMLNVVGN AVKFSNEGNI SIFAFIAKSE SLRDSRAPDF
501: FPVHSDNHFY LRVQVKDSGA GIDPQDISKL FTKFAQCQSL AARNSGGSGL GLAICKRFVN LMGGHIWIES EGLGKGSTAV FIVKLGIPEY SNESKLPFFP
601: KVSANHCQTN FPGLKVLVMD DNGVSRSVTK GLLVHLGCDV TTVSSADDCL RVVSQEHNVV FLDVCMPGVD GYEVAIRIHE KFTTCRQGPL LVALMGNTDR
701: VTKENYLRVG INGVVLKPVS VDKMRCVLSE VLEHRFLFET C

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.