Factsheet for VIT_01s0011g06190.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	75.5	80.24
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	76.36	78.61
KRH41756	Soybean	golgi	75.02	77.46
KRH60456	Soybean	golgi	74.26	77.05
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	71.02	75.1
Solyc04g008110.2.1	Tomato	plasma membrane	70.54	74.52
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.96	71.7
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.88	70.48
CDY17631	Canola	cytosol, peroxisome, plasma membrane	70.07	69.87
CDY03101	Canola	cytosol, peroxisome, plasma membrane	69.88	69.68
AT2G01830.2	Thale cress	cytosol	70.83	68.8
GSMUA_Achr10P...	Banana	cytosol	57.58	68.4
GSMUA_Achr7P11260_001	Banana	mitochondrion	57.67	66.41
CDY03106	Canola	cytosol	4.48	65.28
CDY03102	Canola	cytosol	4.48	65.28
KRH49494	Soybean	mitochondrion	38.7	65.17
Os03t0717700-01	Rice	cytosol, mitochondrion, plasma membrane	60.06	62.69
EER93561	Sorghum	cytosol	59.29	62.45
Zm00001d033786_P004	Maize	plasma membrane	58.63	61.69
HORVU4Hr1G008210.4	Barley	cytosol	58.82	61.45
TraesCS6D01G291900.1	Wheat	mitochondrion	56.72	61.34
TraesCS4D01G050400.1	Wheat	cytosol	58.15	61.24
TraesCS6B01G342700.1	Wheat	mitochondrion	56.63	61.24
TraesCS4A01G264800.1	Wheat	cytosol, peroxisome, plasma membrane	58.25	61.16
TraesCS4B01G050200.1	Wheat	cytosol	58.44	60.81
TraesCS6A01G312500.2	Wheat	cytosol	56.72	60.28
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	58.63	59.77
Zm00001d051812_P003	Maize	mitochondrion	55.29	59.49
Zm00001d017977_P002	Maize	mitochondrion	55.2	59.45
EES07292	Sorghum	mitochondrion	54.91	59.2
Os02t0738400-01	Rice	mitochondrion	56.82	58.89
HORVU6Hr1G077070.5	Barley	mitochondrion	57.1	57.1
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	51.86	52.36
Zm00001d023818_P001	Maize	cytosol	13.63	49.65
VIT_04s0008g03460.t01	Wine grape	plastid	14.97	46.73
VIT_12s0057g00690.t01	Wine grape	endoplasmic reticulum, golgi	54.53	44.97
VIT_19s0093g00580.t01	Wine grape	cytosol	16.49	23.35
VIT_07s0005g00850.t01	Wine grape	cytosol	13.54	22.33
VIT_04s0069g00750.t01	Wine grape	nucleus	17.64	21.87
VIT_14s0081g00630.t01	Wine grape	plasma membrane	13.92	19.21
VIT_05s0049g00090.t01	Wine grape	plasma membrane	13.54	18.59
VIT_04s0023g03680.t01	Wine grape	mitochondrion	20.59	17.49
VIT_07s0005g01380.t01	Wine grape	plasma membrane	17.83	17.09
VIT_06s0004g05240.t01	Wine grape	endoplasmic reticulum, plasma membrane	7.63	14.52

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:100254304	wikigene:100254304	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300
ProteinID:CCB50761	ProteinID:CCB50761.1	InterPro:CHASE_dom	InterPro:CheY-like_superfamily	UniProt:F6HFB2	EMBL:FN595752
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0018106
GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P
InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890
EntrezGene:LOC100254304	wikigene:LOC100254304	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924
PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF16
SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0002107F39	ArrayExpress:VIT_01s0011g06190
EnsemblPlantsGene:VIT_01s0011g06190	EnsemblPlants:VIT_01s0011g06190.t01	unigene:Vvi.8239	RefSeq:XP_002285117	RefSeq:XP_002285117.2	RefSeq:XP_002285117.3
RefSeq:XP_019075175.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:5989626..5998738

Molecular Weight (calculated)

116662.0 Da

IEP (calculated)

7.842

GRAVY (calculated)

-0.172

Length

1049 amino acids

Sequence
(BLAST)

0001: MIIYSKFRVP FCFYSRKSGS ETWGFSSSGL KWEKGRGREA EKEAFLMGLK MQSHHSVAVR LNEQMGTKRG YTFIQANRAW LPKFLVFWIM LMAVFSNFVY
0101: NKMDAANKER REEVLVSMCD QRARMLQDQF SVSVNHVHAL AILVSTFHYY KNPSAIDQET FAEYTARTAF ERPLLSGVAY AQRVAYSERE RFEKQHGWTI
0201: KTMKREASPI RDEYAPVIFS QETVSYIESL DMMSGEEDRE NILRARATGK AVLTSPFRLL GSHHLGVVLT FPVYKSKLPP NPTVEQRIEA TAGYLGGAFD
0301: VESLVENLLG QLAGNQAILV NVYDVTNSSD PLVMYGRQYQ DVDMSLLHES KLDFGDPFRK HQMICRYHQK EPTSWTSLTT AFLFFVIGLL VGYILYGAAI
0401: HIVKVEDDFH EMQELKVRAE AADVAKSQFL ATVSHEIRTP MNGILGMLAL LLDTDLSSTQ RDYAQTAQAC GKALITLINE VLDRAKIEAG KLELEAVPFN
0501: LRSILDDVLS LFSEKSRHKG LELAVFVSDK VPEMVIGDPG RFRQIITNLV GNSVKFTERG HIFVQVHLAE HTKALMDAKA ETCLNGGSDE GLVSNGGSQF
0601: RTLSGCEAAD DQNSWDRFKH LIFDEDLRSD ASNIMTVTSE ASEKVTLMVS VEDTGIGIPL RAQGRVFTPF MQADSSTSRN YGGTGIGLSI SKCLVELMGG
0701: QIKFISRPQI GSTFSFTADF GRCKKNALSD LKKSNSDDLP IGFRGLKAIV VDGRPVRAIV TKYHLKRLGI LVEVANSIKK AVAITGKNGS LTSGSGNQPD
0801: MILVEKDSWI SEEDADLNLR LLDWKQNRHT LKLPKMILLA TNISSAEFDK AKAAGFADTV IMKPLRASMV AACLQQVLGL GKKRQQGKDM LNGSAFLQSL
0901: LCGKKILVVD DNKVNRRVAA GALKKFGADV ECAESGKAAL QLLQLPHNFD ACFMDIQMPE MDGFEATRRI RLIESKANEQ MNGGCTPEGA ATKGEWHVPI
1001: LAMTADVIHA TYDKCLKCGM DGYVSKPFEE ENLYQAVAKF FKSKPISES

Best Arabidopsis Sequence Match ( AT2G01830.5 )
(BLAST)

0001: MQCSILSQLI TDMNWALNNH QEEEEEPRRI EISDSESLEN LKSSDFYQLG GGGALNSSEK PRKIDFWRSG LMGFAKMQQQ QQLQHSVAVK MNNNNNNDLM
0101: GNKKGSTFIQ EHRALLPKAL ILWIIIVGFI SSGIYQWMDD ANKIRREEVL VSMCDQRARM LQDQFSVSVN HVHALAILVS TFHYHKNPSA IDQETFAEYT
0201: ARTAFERPLL SGVAYAEKVV NFEREMFERQ HNWVIKTMDR GEPSPVRDEY APVIFSQDSV SYLESLDMMS GEEDRENILR ARETGKAVLT SPFRLLETHH
0301: LGVVLTFPVY KSSLPENPTV EERIAATAGY LGGAFDVESL VENLLGQLAG NQAIVVHVYD ITNASDPLVM YGNQDEEADR SLSHESKLDF GDPFRKHKMI
0401: CRYHQKAPIP LNVLTTVPLF FAIGFLVGYI LYGAAMHIVK VEDDFHEMQE LKVRAEAADV AKSQFLATVS HEIRTPMNGI LGMLAMLLDT ELSSTQRDYA
0501: QTAQVCGKAL IALINEVLDR AKIEAGKLEL ESVPFDIRSI LDDVLSLFSE ESRNKSIELA VFVSDKVPEI VKGDSGRFRQ IIINLVGNSV KFTEKGHIFV
0601: KVHLAEQSKD ESEPKNALNG GVSEEMIVVS KQSSYNTLSG YEAADGRNSW DSFKHLVSEE QSLSEFDISS NVRLMVSIED TGIGIPLVAQ GRVFMPFMQA
0701: DSSTSRNYGG TGIGLSISKC LVELMRGQIN FISRPHIGST FWFTAVLEKC DKCSAINHMK KPNVEHLPST FKGMKAIVVD AKPVRAAVTR YHMKRLGINV
0801: DVVTSLKTAV VAAAAFERNG SPLPTKPQLD MILVEKDSWI STEDNDSEIR LLNSRTNGNV HHKSPKLALF ATNITNSEFD RAKSAGFADT VIMKPLRASM
0901: IGACLQQVLE LRKTRQQHPE GSSPATLKSL LTGKKILVVD DNIVNRRVAA GALKKFGAEV VCAESGQVAL GLLQIPHTFD ACFMDIQMPQ MDGFEATRQI
1001: RMMEKETKEK TNLEWHLPIL AMTADVIHAT YEECLKSGMD GYVSKPFEEE NLYKSVAKSF KPNPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.