Factsheet for GSMUA_Achr8P22930_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	75.0	72.03
GSMUA_Achr7P11260_001	Banana	mitochondrion	74.88	69.7
CDY03102	Canola	cytosol	5.07	59.72
CDY03106	Canola	cytosol	5.07	59.72
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	67.69	58.16
VIT_01s0011g06190.t01	Wine grape	mitochondrion	71.7	57.96
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	67.1	57.36
Solyc04g008110.2.1	Tomato	plasma membrane	67.1	57.3
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	68.04	56.62
KRH41756	Soybean	golgi	67.1	56.0
KRH60456	Soybean	golgi	66.75	55.98
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.57	53.46
GSMUA_Achr4P17470_001	Banana	cytosol	48.58	53.16
CDY03101	Canola	cytosol, peroxisome, plasma membrane	65.68	52.95
CDY17631	Canola	cytosol, peroxisome, plasma membrane	65.68	52.95
GSMUA_AchrUn_...	Banana	cytosol	59.08	52.63
AT2G01830.2	Thale cress	cytosol	66.51	52.22
KRH49494	Soybean	mitochondrion	35.73	48.64
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	53.18	46.26
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	54.01	45.89
GSMUA_Achr1P22740_001	Banana	cytosol	43.99	45.82
GSMUA_Achr4P15980_001	Banana	cytosol	53.89	45.79
GSMUA_Achr5P00120_001	Banana	cytosol	10.85	25.7
GSMUA_Achr1P23390_001	Banana	cytosol	21.58	20.94
GSMUA_Achr11P...	Banana	cytosol	14.5	19.37
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.74	18.72
GSMUA_Achr3P22920_001	Banana	extracellular	20.4	18.02
GSMUA_Achr11P...	Banana	plasma membrane	14.74	16.49
GSMUA_Achr7P26840_001	Banana	plasma membrane	12.5	15.99
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	13.21	14.8
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	10.73	13.96
GSMUA_Achr11P...	Banana	cytosol	5.9	13.59

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	InterPro:CHASE_dom
InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr8G22930_001	EnsemblPlants:GSMUA_Achr8P22930_001	EnsemblPlants:GSMUA_Achr8T22930_001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189
InterPro:IPR036890	UniProt:M0TSU6	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924
PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF2
SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI00029505C4	SEG:seg

Description

Histidine kinase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22930_001]

Coordinates

chr8:-:27443312..27452325

Molecular Weight (calculated)

94490.2 Da

IEP (calculated)

5.705

GRAVY (calculated)

-0.112

Length

848 amino acids

Sequence
(BLAST)

001: MIQDQFAVSV NHVHALAILI STFYYQKQPP ALDQETFAYY TAKTAFERPL LNGVAYAERI IHSQREIFET RQGWTIMTMK REPSPMQDEY APVIYSQETV
101: SYIEAIDMMS GEEDRENILR ARATGKAVLT KPFRLLESNH LGVVLTFPVY RSGLPEDATV EQRVEATAGY LGGAFDVESL VENLLRQLAG NQDITINVYD
201: ITNASEPLIM YGPQIPEGYM PLSHVSMLDF GDPFRKHQMH CRYREKPPLP LSAITTPFGI FVIIMLGGYI VFAAKNHYDN VKEDCRKMEE LKVQAEAADF
301: LATVSHEIRT PMNGVLGMLD MLLDTDLNLT QKDYAQTAQV CGKALISLIN EVLDRAKIEA GKLEIEAVPF DLRSILDDVI SLFSSKSREK GIELAVFVSD
401: KVPEVVTGDP GRFRQIITNL VGNSVKFTER GHIFVQVHLA DNSDLGADEK VYSGLNGLSQ SEKASTSDKE PDIVTLIVRV EDTGIGIPLC AQDRVFTPFM
501: QADSSTSRNY GGTGIGLSIT KCLVELMGGQ INFISRPNVG STFTFTAVFK RCNKDAIADT KRTLSEALPT GFRGMKAFIV DGKPVRNAVT RYHLKRLGIA
601: VEVANTVKMM LNSLTRQNSN FRTGRQPYII LIEKDSWYTG MDVYLHNQLL LLKQNDCVLE LPKIILLVTC EYDKMSTGSL VDTVINKPLR ASTVAACLQQ
701: VLGMEKQQKK ELSNGPTNLR NLLAGKNILV IDDNKVNLRV AASALKKYGA RVECAESGKD ALSLLQLPHK FDACFMDVQM PEMDGFEATR QILEWHLPIL
801: AMTADVIQAT YEECLKCGMD GYVSKPFEEQ QLFQAVAKFL VSKPSSDS

Best Arabidopsis Sequence Match ( AT2G01830.3 )
(BLAST)

0001: MNWALNNHQE EEEEPRRIEI SDSESLENLK SSDFYQLGGG GALNSSEKPR KIDFWRSGLM GFAKMQQQQQ LQHSVAVKMN NNNNNDLMGN KKGSTFIQEH
0101: RALLPKALIL WIIIVGFISS GIYQWMDDAN KIRREEVLVS MCDQRARMLQ DQFSVSVNHV HALAILVSTF HYHKNPSAID QETFAEYTAR TAFERPLLSG
0201: VAYAEKVVNF EREMFERQHN WVIKTMDRGE PSPVRDEYAP VIFSQDSVSY LESLDMMSGE EDRENILRAR ETGKAVLTSP FRLLETHHLG VVLTFPVYKS
0301: SLPENPTVEE RIAATAGYLG GAFDVESLVE NLLGQLAGNQ AIVVHVYDIT NASDPLVMYG NQDEEADRSL SHESKLDFGD PFRKHKMICR YHQKAPIPLN
0401: VLTTVPLFFA IGFLVGYILY GAAMHIVKVE DDFHEMQELK VRAEAADVAK SQFLATVSHE IRTPMNGILG MLAMLLDTEL SSTQRDYAQT AQVCGKALIA
0501: LINEVLDRAK IEAGKLELES VPFDIRSILD DVLSLFSEES RNKSIELAVF VSDKVPEIVK GDSGRFRQII INLVGNSVKF TEKGHIFVKV HLAEQSKDES
0601: EPKNALNGGV SEEMIVVSKQ SSYNTLSGYE AADGRNSWDS FKHLVSEEQS LSEFDISSNV RLMVSIEDTG IGIPLVAQGR VFMPFMQADS STSRNYGGTG
0701: IGLSISKCLV ELMRGQINFI SRPHIGSTFW FTAVLEKCDK CSAINHMKKP NVEHLPSTFK GMKAIVVDAK PVRAAVTRYH MKRLGINVDV VTSLKTAVVA
0801: AAAFERNGSP LPTKPQLDMI LVEKDSWIST EDNDSEIRLL NSRTNGNVHH KSPKLALFAT NITNSEFDRA KSAGFADTVI MKPLRASMIG ACLQQVLELR
0901: KTRQQHPEGS SPATLKSLLT GKKILVVDDN IVNRRVAAGA LKKFGAEVVC AESGQVALGL LQIPHTFDAC FMDIQMPQMD GFEATRQIRM MEKETKEKTN
1001: LEWHLPILAM TADVIHATYE ECLKSGMDGY VSKPFEEENL YKSVAKSFKP NPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.