Factsheet for GSMUA_Achr5P00120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P07600_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr8P07600_001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.95	44.02
GSMUA_Achr11P...	Banana	cytosol	76.54	43.15
VIT_07s0005g00850.t01	Wine grape	cytosol	72.91	41.04
EES19059	Sorghum	plasma membrane	71.23	40.35
KRH68220	Soybean	cytosol	69.83	39.31
Zm00001d037604_P001	Maize	plastid	68.99	39.27
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	68.72	38.56
KRG96477	Soybean	cytosol	68.16	38.36
TraesCS1D01G105600.1	Wheat	cytosol, golgi, plasma membrane	68.16	38.18
Solyc09g075440.2.1	Tomato	plasma membrane	67.32	37.95
TraesCS1A01G096600.1	Wheat	cytosol, golgi, plasma membrane	67.6	37.93
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	67.32	37.77
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	66.76	37.64
CDX80113	Canola	plasma membrane	63.41	37.03
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	62.57	36.54
Bra004449.1-P	Field mustard	plasma membrane	62.29	36.5
CDY63851	Canola	plasma membrane	63.41	36.44
Os05t0155200-01	Rice	plasma membrane	51.68	35.71
GSMUA_Achr11P...	Banana	cytosol	29.61	28.8
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	29.05	13.74
GSMUA_Achr11P...	Banana	plasma membrane	27.93	13.19
GSMUA_Achr4P17470_001	Banana	cytosol	24.86	11.48
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.7	10.85
GSMUA_Achr1P23390_001	Banana	cytosol	25.7	10.53
GSMUA_Achr7P26840_001	Banana	plasma membrane	19.27	10.41
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	28.21	10.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.72	10.28
GSMUA_Achr4P15980_001	Banana	cytosol	28.21	10.12
GSMUA_AchrUn_...	Banana	cytosol	26.54	9.98
GSMUA_Achr10P...	Banana	cytosol	24.3	9.85
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	27.37	9.82
GSMUA_Achr7P11260_001	Banana	mitochondrion	23.74	9.33
GSMUA_Achr1P22740_001	Banana	cytosol	20.11	8.85
GSMUA_Achr3P22920_001	Banana	extracellular	21.23	7.92

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.565.10	ncoils:Coil	GO:GO:0000155	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr5G00120_001	EnsemblPlants:GSMUA_Achr5P00120_001	EnsemblPlants:GSMUA_Achr5T00120_001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR036890	UniProt:M0SUE1
PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PANTHER:PTHR24423	PANTHER:PTHR24423:SF545
SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	UniParc:UPI000295DC07
SEG:seg	:	:	:	:	:

Description

Ethylene receptor [Source:GMGC_GENE;Acc:GSMUA_Achr5G00120_001]

Coordinates

chr5:+:70655..76677

Molecular Weight (calculated)

39354.7 Da

IEP (calculated)

6.439

GRAVY (calculated)

-0.044

Length

358 amino acids

Sequence
(BLAST)

001: MVLMLPSDSA RKWHIHELEL VEVVADQVAV ALSHAAILEE SMRARDLLME QNVALDSARR EAEMAIRARN DFLAVMNHEM RTPMHAVIAL SSLLLETELT
101: PEQRLMIETV LKSSNLLAAL INDVLDLSKL EDGSFELEIA NFNLHAVFRE VINLIKPIAA VKKLSVSVTL APDLPLCAIG DEKRLMQTIL NVAGNAVKFT
201: KEGHISITAS VARSDSSRDP RAPEFSPVTS DRHFDLRVQI KDTGCGISPQ DLPHIFTKFA HSRNSANKAS NGSGLGLAIC RRFVSLMEGQ IWLESEGIGK
301: GCTATFIVKL GICDPSGNLQ QILQTTPSHG DANLPGPRAK FDDENGKFTP MMRYQRSV

Best Arabidopsis Sequence Match ( AT2G40940.1 )
(BLAST)

001: MESCDCFETH VNQDDLLVKY QYISDALIAL AYFSIPLELI YFVQKSAFFP YKWVLMQFGA FIILCGATHF INLWMFFMHS KAVAIVMTIA KVSCAVVSCA
101: TALMLVHIIP DLLSVKNREL FLKKKADELD REMGLILTQE ETGRHVRMLT HGIRRTLDRH TILRTTLVEL GKTLCLEECA LWMPSQSGLY LQLSHTLSHK
201: IQVGSSVPIN LPIINELFNS AQAMHIPHSC PLAKIGPPVG RYSPPEVVSV RVPLLHLSNF QGSDWSDLSG KGYAIMVLIL PTDGARKWRD HELELVENVA
301: DQVAVALSHA AILEESMHAR DQLMEQNFAL DKARQEAEMA VHARNDFLAV MNHEMRTPMH AIISLSSLLL ETELSPEQRV MIETILKSSN LVATLISDVL
401: DLSRLEDGSL LLENEPFSLQ AIFEEVISLI KPIASVKKLS TNLILSADLP TYAIGDEKRL MQTILNIMGN AVKFTKEGYI SIIASIMKPE SLQELPSPEF
501: FPVLSDSHFY LCVQVKDTGC GIHTQDIPLL FTKFVQPRTG TQRNHSGGGL GLALCKRFVG LMGGYMWIES EGLEKGCTAS FIIRLGICNG PSSSSGSMAL
601: HLAAKSQTRP WNW

Arabidopsis Description

ERS1Ethylene response sensor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38846]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.