Factsheet for GSMUA_Achr5P21290_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
vacuole 3
plastid 1
cytosol 1
endoplasmic reticulum 3
extracellular 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P07600_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr8P07600_001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	85.96	78.11
GSMUA_Achr5P00120_001	Banana	cytosol	44.02	70.95
TraesCS5B01G001600.1	Wheat	plasma membrane	75.39	69.05
TraesCS5A01G002600.1	Wheat	cytosol, plasma membrane, vacuole	75.74	69.04
TraesCS5D01G002600.1	Wheat	cytosol, plasma membrane, vacuole	75.56	68.88
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	75.91	68.87
EER91030	Sorghum	cytosol	75.04	68.19
Zm00001d033642_P001	Maize	plasma membrane	74.87	68.14
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	74.87	68.03
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	74.7	67.87
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	74.7	67.87
Zm00001d013486_P001	Maize	plasma membrane	74.52	67.82
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	28.25	65.99
HORVU4Hr1G006260.4	Barley	plastid	72.44	65.11
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	75.56	65.07
VIT_07s0005g00850.t01	Wine grape	cytosol	71.23	64.62
GSMUA_Achr11P...	Banana	cytosol	39.86	62.5
KRG96477	Soybean	cytosol	68.63	62.26
CDX80113	Canola	plasma membrane	65.68	61.83
KRH68220	Soybean	cytosol	68.11	61.79
TraesCS4A01G344200.1	Wheat	cytosol, golgi, plasma membrane	32.76	61.76
Bra004449.1-P	Field mustard	plasma membrane	65.16	61.54
HORVU6Hr1G045040.2	Barley	cytosol	37.44	61.19
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	37.78	61.06
CDY63851	Canola	plasma membrane	65.86	61.0
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	39.34	60.53
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	64.3	60.52
Solyc09g075440.2.1	Tomato	plasma membrane	65.34	59.37
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	64.99	59.06
Zm00001d043247_P001	Maize	nucleus	19.58	33.93
Zm00001d013338_P002	Maize	cytosol	19.24	29.68
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	34.49	26.29
GSMUA_Achr11P...	Banana	plasma membrane	34.32	26.12
GSMUA_Achr7P26840_001	Banana	plasma membrane	25.48	22.17
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	23.57	20.86
GSMUA_Achr4P17470_001	Banana	cytosol	19.41	14.45
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	18.72	12.74
GSMUA_Achr10P...	Banana	cytosol	19.06	12.46
GSMUA_Achr1P23390_001	Banana	cytosol	18.72	12.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	20.62	12.21
GSMUA_AchrUn_...	Banana	cytosol	19.76	11.97
GSMUA_Achr4P15980_001	Banana	cytosol	20.28	11.72
GSMUA_Achr7P11260_001	Banana	mitochondrion	18.37	11.64
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	20.1	11.62
GSMUA_Achr1P22740_001	Banana	cytosol	14.73	10.44
GSMUA_Achr3P22920_001	Banana	extracellular	14.9	8.96

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	InterPro:GAF	InterPro:GAF-like_dom_sf
GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr5G21290_001	EnsemblPlants:GSMUA_Achr5P21290_001	EnsemblPlants:GSMUA_Achr5T21290_001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890
UniProt:M0T0F8	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109
PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	SMART:SM00065	SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384
SUPFAM:SSF55781	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	UniParc:UPI000296924F	SEG:seg	:

Description

Ethylene receptor [Source:GMGC_GENE;Acc:GSMUA_Achr5G21290_001]

Coordinates

chr5:+:23339426..23348818

Molecular Weight (calculated)

64180.3 Da

IEP (calculated)

7.699

GRAVY (calculated)

0.064

Length

577 amino acids

Sequence
(BLAST)

001: XXAFIVLCGA THLINLWTFA LHSRTLAIVM TVAKVSTAVV SCATALMLVH IIPDLLSVKT RELFLKNKAE ELDREMGLIR TQEETGRHVR MLTHEIRSTL
101: DRDTVLKTTL VELGRTLDLK DCMLWMPSHS GTSLQLSHTL HHQIPTGSAV PINLPVVNQI FSSNHAMIIP HTCRLARIWP LSVRHVPPEV AAVRVPLLHL
201: SNFQISDWSE LSTKSYAVMV LILPSDSGRK WHVHELELVE VVADQVAVAL SHAAILAESM RARDLLTEQN VALYLARQEA ELAIRARNDF LAVMNHEMRT
301: PLHATITLSS LLLETELSPE QRSMVETVLK SSSLLATLIN DILDLSRLED GSLELEIGDF NLHSVFREVM NFIKPIAAVK KLQVSLMLSP DLPLYAIGDE
401: KRLMQIMLNV AANAVRFTKE GDISLTASVA RTDYLRDFRA LDFYPVASDG HFYLRVQIKD TGCGISYQDL PNLFTKFSQS QNVSSQGYSG NGLGLAICER
501: YVSLMQGHIW VESDGIGKGC TATFVVRLRL CENPDGSQQK ILPLPWKKQT QKFSSSRGMP TDPGGLIRLK TRYQKSV

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.