Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G302000.1 | |
| TraesCS4B01G012100.1 | |
| TraesCS4D01G010200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G40940.1 | TraesCS4A01G302000.1 | AT5G03730.1 | 9560288 |
| AT2G40940.1 | TraesCS4B01G012100.1 | AT5G03730.1 | 9560288 |
| AT2G40940.1 | TraesCS4D01G010200.1 | AT5G03730.1 | 9560288 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G036400.2 | Wheat | cytosol, golgi, plasma membrane | 99.53 | 99.53 |
| TraesCS4B01G039300.1 | Wheat | cytosol, golgi, plasma membrane | 99.37 | 99.37 |
| Os03t0701700-02 | Rice | cytosol, plasma membrane, vacuole | 91.65 | 91.51 |
| EER91030 | Sorghum | cytosol | 90.39 | 90.39 |
| Zm00001d033642_P001 | Maize | plasma membrane | 89.92 | 90.06 |
| Zm00001d013486_P001 | Maize | plasma membrane | 89.76 | 89.91 |
| TraesCS5A01G002600.1 | Wheat | cytosol, plasma membrane, vacuole | 87.24 | 87.52 |
| HORVU4Hr1G006260.4 | Barley | plastid | 88.35 | 87.38 |
| Zm00001d028026_P001 | Maize | endoplasmic reticulum, extracellular | 33.07 | 85.02 |
| TraesCS4A01G344200.1 | Wheat | cytosol, golgi, plasma membrane | 39.06 | 81.05 |
| GSMUA_Achr11P... | Banana | cytosol | 79.37 | 79.37 |
| GSMUA_Achr11P... | Banana | cytosol | 44.88 | 77.45 |
| GSMUA_Achr5P21290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 67.87 | 74.7 |
| VIT_07s0005g00850.t01 | Wine grape | cytosol | 74.65 | 74.53 |
| KRG96477 | Soybean | cytosol | 72.91 | 72.8 |
| KRH68220 | Soybean | cytosol | 72.6 | 72.48 |
| CDX80113 | Canola | plasma membrane | 68.19 | 70.64 |
| Bra004449.1-P | Field mustard | plasma membrane | 67.56 | 70.21 |
| AT2G40940.1 | Thale cress | cytosol, nucleus, plasma membrane | 67.4 | 69.82 |
| CDY63851 | Canola | plasma membrane | 68.35 | 69.66 |
| TraesCS1A01G096600.1 | Wheat | cytosol, golgi, plasma membrane | 69.29 | 68.97 |
| Solyc09g075440.2.1 | Tomato | plasma membrane | 67.4 | 67.4 |
| PGSC0003DMT400081399 | Potato | cytosol, plasma membrane, vacuole | 67.09 | 67.09 |
| Zm00001d043247_P001 | Maize | nucleus | 23.94 | 45.65 |
| Zm00001d013338_P002 | Maize | cytosol | 23.46 | 39.84 |
| TraesCS2A01G000200.1 | Wheat | plasma membrane | 36.54 | 29.82 |
| TraesCS6A01G399400.2 | Wheat | mitochondrion, plasma membrane | 36.69 | 28.8 |
| TraesCS6A01G329400.1 | Wheat | plasma membrane | 31.02 | 26.99 |
| TraesCS6A01G285800.1 | Wheat | plasma membrane | 30.71 | 26.79 |
| TraesCS2A01G472800.2 | Wheat | nucleus | 14.02 | 14.81 |
| TraesCS6A01G312500.2 | Wheat | cytosol | 20.47 | 13.17 |
| TraesCS3A01G433200.1 | Wheat | peroxisome | 20.79 | 13.16 |
| TraesCS4A01G264800.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.63 | 13.11 |
| TraesCS7A01G498200.2 | Wheat | nucleus | 17.32 | 11.36 |
| TraesCS4A01G340900.1 | Wheat | endoplasmic reticulum, golgi | 12.28 | 10.63 |
| TraesCS7A01G146600.1 | Wheat | plasma membrane | 14.02 | 8.23 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.5.2.1 | Gene3D:3.30.450.40 | Gene3D:3.30.565.10 | InterPro:GAF | InterPro:GAF-like_dom_sf |
| GO:GO:0000155 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016772 | GO:GO:0019538 | GO:GO:0038023 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR005467 |
| InterPro:IPR029016 | InterPro:IPR036890 | PFAM:PF00512 | PFAM:PF01590 | PFAM:PF02518 | PRINTS:PR00344 |
| PFscan:PS50109 | PANTHER:PTHR24423 | PANTHER:PTHR24423:SF615 | SMART:SM00065 | SMART:SM00387 | SMART:SM00388 |
| SUPFAM:SSF47384 | SUPFAM:SSF55781 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G274300 |
| EnsemblPlants:TraesCS4A01G274300.1 | TIGR:cd00075 | TIGR:cd00082 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:+:584272892..584276246
Molecular Weight (calculated)
70993.7 Da
IEP (calculated)
6.954
GRAVY (calculated)
0.109
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MERCDCIEPL WPTDELLIKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA FIVLCGATHL INLWTFTTHT KTVAMVMTVA KVSTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAEELD WEMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTIVEL GRTLGLEECA LWMPSRSGSS LQLSHTLRHQ
201: ITVGSSISIN LPVINQVFSS NRAIIIPHTS PLARIRPLAG RYVPPEVAAV RVPLLNLSNF QINDWPELSA KSYAIMVLML PSDSARNWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL
401: DLSKLEDRSL ELEIRAFNLH AVFKEVMGFI RPIAAIKRLS MSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI TLLASVLKPD SLREFRTPDF
501: HPAASDDHFY LKVQLKDTGC GISPQDLPHV FTKFAQTQPG GNQGYSGSGL GLAICRRFVT LMGGHIWLDS EGAGRGCTAT FIIRLGVSDN TDAYQQQLAP
601: LAWPGSANVE SAGPKALHEE TWPPSSLKPR YQRSV
101: TALMLVHIIP DLLSVKTREL FLKNKAEELD WEMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTIVEL GRTLGLEECA LWMPSRSGSS LQLSHTLRHQ
201: ITVGSSISIN LPVINQVFSS NRAIIIPHTS PLARIRPLAG RYVPPEVAAV RVPLLNLSNF QINDWPELSA KSYAIMVLML PSDSARNWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL
401: DLSKLEDRSL ELEIRAFNLH AVFKEVMGFI RPIAAIKRLS MSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI TLLASVLKPD SLREFRTPDF
501: HPAASDDHFY LKVQLKDTGC GISPQDLPHV FTKFAQTQPG GNQGYSGSGL GLAICRRFVT LMGGHIWLDS EGAGRGCTAT FIIRLGVSDN TDAYQQQLAP
601: LAWPGSANVE SAGPKALHEE TWPPSSLKPR YQRSV
001: MESCDCFETH VNQDDLLVKY QYISDALIAL AYFSIPLELI YFVQKSAFFP YKWVLMQFGA FIILCGATHF INLWMFFMHS KAVAIVMTIA KVSCAVVSCA
101: TALMLVHIIP DLLSVKNREL FLKKKADELD REMGLILTQE ETGRHVRMLT HGIRRTLDRH TILRTTLVEL GKTLCLEECA LWMPSQSGLY LQLSHTLSHK
201: IQVGSSVPIN LPIINELFNS AQAMHIPHSC PLAKIGPPVG RYSPPEVVSV RVPLLHLSNF QGSDWSDLSG KGYAIMVLIL PTDGARKWRD HELELVENVA
301: DQVAVALSHA AILEESMHAR DQLMEQNFAL DKARQEAEMA VHARNDFLAV MNHEMRTPMH AIISLSSLLL ETELSPEQRV MIETILKSSN LVATLISDVL
401: DLSRLEDGSL LLENEPFSLQ AIFEEVISLI KPIASVKKLS TNLILSADLP TYAIGDEKRL MQTILNIMGN AVKFTKEGYI SIIASIMKPE SLQELPSPEF
501: FPVLSDSHFY LCVQVKDTGC GIHTQDIPLL FTKFVQPRTG TQRNHSGGGL GLALCKRFVG LMGGYMWIES EGLEKGCTAS FIIRLGICNG PSSSSGSMAL
601: HLAAKSQTRP WNW
101: TALMLVHIIP DLLSVKNREL FLKKKADELD REMGLILTQE ETGRHVRMLT HGIRRTLDRH TILRTTLVEL GKTLCLEECA LWMPSQSGLY LQLSHTLSHK
201: IQVGSSVPIN LPIINELFNS AQAMHIPHSC PLAKIGPPVG RYSPPEVVSV RVPLLHLSNF QGSDWSDLSG KGYAIMVLIL PTDGARKWRD HELELVENVA
301: DQVAVALSHA AILEESMHAR DQLMEQNFAL DKARQEAEMA VHARNDFLAV MNHEMRTPMH AIISLSSLLL ETELSPEQRV MIETILKSSN LVATLISDVL
401: DLSRLEDGSL LLENEPFSLQ AIFEEVISLI KPIASVKKLS TNLILSADLP TYAIGDEKRL MQTILNIMGN AVKFTKEGYI SIIASIMKPE SLQELPSPEF
501: FPVLSDSHFY LCVQVKDTGC GIHTQDIPLL FTKFVQPRTG TQRNHSGGGL GLALCKRFVG LMGGYMWIES EGLEKGCTAS FIIRLGICNG PSSSSGSMAL
601: HLAAKSQTRP WNW
Arabidopsis Description
ERS1Ethylene response sensor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38846]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.