Factsheet for Zm00001d043247_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005348_P001
Zm00001d016675_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	Zm00001d005348_P001	AT5G03730.1	9560288
AT2G40940.1	Zm00001d016675_P001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013338_P002	Maize	cytosol	73.57	65.51
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	47.15	63.56
Zm00001d013486_P001	Maize	plasma membrane	52.55	27.6
Zm00001d033642_P001	Maize	plasma membrane	51.35	26.97
EER91030	Sorghum	cytosol	51.35	26.93
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	46.85	24.53
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	45.65	23.94
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	45.65	23.94
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	45.05	23.62
HORVU4Hr1G006260.4	Barley	plastid	44.14	22.9
GSMUA_Achr11P...	Banana	cytosol	39.64	20.79
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.93	19.58
VIT_07s0005g00850.t01	Wine grape	cytosol	37.24	19.5
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	35.44	19.25
CDX80113	Canola	plasma membrane	35.44	19.25
CDY63851	Canola	plasma membrane	35.74	19.1
Zm00001d037604_P001	Maize	plastid	35.74	18.92
KRG96477	Soybean	cytosol	35.44	18.55
Bra004449.1-P	Field mustard	plasma membrane	33.93	18.49
KRH68220	Soybean	cytosol	35.14	18.4
Solyc09g075440.2.1	Tomato	plasma membrane	34.23	17.95
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	33.93	17.8
Zm00001d023818_P001	Maize	cytosol	11.11	12.85
Zm00001d004372_P003	Maize	plasma membrane	20.12	8.7
Zm00001d051889_P002	Maize	endoplasmic reticulum	19.22	8.49
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	19.52	8.08
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	16.82	7.62
Zm00001d053594_P001	Maize	plasma membrane	18.32	7.6
Zm00001d014297_P006	Maize	cytosol	20.72	7.33
Zm00001d033786_P004	Maize	plasma membrane	21.02	7.02
Zm00001d036704_P002	Maize	nucleus	20.12	6.94
Zm00001d042312_P003	Maize	golgi, mitochondrion, plasma membrane	20.72	6.85
Zm00001d017977_P002	Maize	mitochondrion	19.82	6.78
Zm00001d051812_P003	Maize	mitochondrion	19.82	6.77
Zm00001d046928_P002	Maize	nucleus	19.82	6.76
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	20.72	6.71
Zm00001d012005_P002	Maize	plasma membrane	20.72	6.61
GSMUA_Achr11P...	Banana	cytosol	6.91	6.25
Zm00001d021687_P001	Maize	plasma membrane	15.62	6.08
Zm00001d035846_P001	Maize	extracellular	18.92	6.08

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.5.2.1	Gene3D:3.30.565.10	UniProt:A0A1D6N9Q5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:His_kinase_dom
InterPro:Homeobox-like_sf	InterPro:IPR005467	InterPro:IPR017930	InterPro:IPR036890	InterPro:Myb_dom	ProteinID:ONM37276.1
PFAM:PF02518	PFAM:PF13921	PRINTS:PR00344	PFscan:PS50109	PFscan:PS51294	PANTHER:PTHR24423
PANTHER:PTHR24423:SF615	InterPro:SANT/Myb	SMART:SM00387	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF55874
InterPro:Sig_transdc_His_kin-like_C	UniParc:UPI0008425443	EnsemblPlantsGene:Zm00001d043247	EnsemblPlants:Zm00001d043247_P001	EnsemblPlants:Zm00001d043247_T001	SEG:seg

Description

Ethylene response sensor 1

Coordinates

chr3:+:193129483..193136306

Molecular Weight (calculated)

37157.2 Da

IEP (calculated)

10.299

GRAVY (calculated)

-0.282

Length

333 amino acids

Sequence
(BLAST)

001: MTSFLTKKNC QAQLIYWDSK VSEVDMDAMW KHPDVYKEWI KSGERRGNVR FSHDAKNRPY LSHVEVKVMG FIKPIASIKR LSVSVMLAPD LPLCAIGDEK
101: RLMQTILNIS GNAVKFTKEG HITLVASIVK ADSLREFRTP EFHPTASDEH FYLKVQVKDT GCGVSPQDLP HVFTKFAHPQ SGGNRGFNGS GLGLAICKRF
201: VSLMGGHIWI DSEGTGRGCT ATFVIKLGGL SLGIEKDRTS TVAMGFVDDS KVVTCSPPSI NEKNDRTLVK LVEQFGPRKW SYIAQLLPAR VGKRCRERWH
301: KHLRPNIKGT IFQCLLYRSS ARGARGGGYV KMS

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.