Factsheet for PGSC0003DMT400081399

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 3
cytosol 1
endoplasmic reticulum 2
extracellular 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400020285
PGSC0003DMT400021612
PGSC0003DMT400071109

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	PGSC0003DMT400020285	AT1G66340.1	18577522
AT2G40940.1	PGSC0003DMT400071109	AT1G66340.1	18577522
AT2G40940.1	PGSC0003DMT400021612	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g075440.2.1	Tomato	plasma membrane	98.58	98.58
VIT_07s0005g00850.t01	Wine grape	cytosol	74.33	74.21
KRG96477	Soybean	cytosol	71.5	71.38
KRH68220	Soybean	cytosol	71.34	71.23
Os05t0155200-01	Rice	plasma membrane	56.85	69.69
GSMUA_Achr11P...	Banana	cytosol	40.31	69.57
Zm00001d033642_P001	Maize	plasma membrane	69.45	69.56
EER91030	Sorghum	cytosol	69.29	69.29
Zm00001d013486_P001	Maize	plasma membrane	68.98	69.09
CDX80113	Canola	plasma membrane	66.61	69.0
GSMUA_Achr11P...	Banana	cytosol	68.98	68.98
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	66.46	68.84
Bra004449.1-P	Field mustard	plasma membrane	65.98	68.58
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	68.66	68.55
TraesCS5B01G001600.1	Wheat	plasma membrane	67.87	68.41
TraesCS5A01G002600.1	Wheat	cytosol, plasma membrane, vacuole	68.19	68.4
TraesCS5D01G002600.1	Wheat	cytosol, plasma membrane, vacuole	68.03	68.25
CDY63851	Canola	plasma membrane	66.46	67.74
TraesCS4A01G344200.1	Wheat	cytosol, golgi, plasma membrane	32.6	67.65
EES19059	Sorghum	plasma membrane	66.93	67.25
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	67.09	67.09
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	66.93	66.93
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	66.77	66.77
GSMUA_Achr5P00120_001	Banana	cytosol	37.64	66.76
HORVU6Hr1G045040.2	Barley	cytosol	37.01	66.57
Zm00001d037604_P001	Maize	plastid	65.51	66.14
TraesCS1A01G096600.1	Wheat	cytosol, golgi, plasma membrane	65.51	65.2
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	65.51	65.2
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.06	64.99
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	36.54	64.99
TraesCS1D01G105600.1	Wheat	cytosol, golgi, plasma membrane	65.2	64.79
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	64.72	64.42
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	67.87	64.33
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	37.64	63.73
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	23.46	60.32
HORVU4Hr1G006260.4	Barley	plastid	58.74	58.1
PGSC0003DMT400071109	Potato	cytosol, endoplasmic reticulum, plasma membrane	66.93	57.74
PGSC0003DMT400020285	Potato	endoplasmic reticulum, plasma membrane, plastid	66.93	56.37
Zm00001d043247_P001	Maize	nucleus	17.8	33.93
PGSC0003DMT400041983	Potato	plasma membrane	36.54	30.49
PGSC0003DMT400073847	Potato	plasma membrane	36.22	29.99
Zm00001d013338_P002	Maize	cytosol	17.32	29.41
PGSC0003DMT400044244	Potato	plasma membrane	34.49	29.08
PGSC0003DMT400060160	Potato	endoplasmic reticulum	34.02	28.31
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	14.33	16.91
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	21.73	13.91
PGSC0003DMT400075949	Potato	cytosol	20.32	12.72
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	11.97	9.92
PGSC0003DMT400009219	Potato	plastid	17.95	9.41
PGSC0003DMT400015729	Potato	cytosol	3.62	6.25

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:102577920	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	ProteinID:AAD12777
ProteinID:AAD12777.1	ProteinID:AAR21569	ProteinID:AAR21569.1	EMBL:AF051938	EMBL:AY456694	InterPro:GAF
InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0051740	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR029016
InterPro:IPR036890	UniProt:M1D4Q0	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518	EnsemblPlantsGene:PGSC0003DMG400031819
PGSC:PGSC0003DMG400031819	EnsemblPlants:PGSC0003DMT400081399	PRINTS:PR00344	PFscan:PS50109	PANTHER:PTHR24423	PANTHER:PTHR24423:SF615
SMART:SM00065	SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384	SUPFAM:SSF55781	SUPFAM:SSF55874
InterPro:Sig_transdc_His_kin-like_C	TMHMM:TMhelix	UniParc:UPI000294D847	RefSeq:XP_006359867.1	RefSeq:XP_006359868.1	RefSeq:XP_006359869.1
SEG:seg	:	:	:	:	:

Description

Ethylene receptor homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400031819]

Coordinates

chr9:-:52922466..52930013

Molecular Weight (calculated)

70896.3 Da

IEP (calculated)

6.918

GRAVY (calculated)

0.180

Length

635 amino acids

Sequence
(BLAST)

001: MESCDCIEAL LPTGDLLVKY QYLSDFFIAV AYFSIPLELI YFVHKSACFP YRWVLMQFGA FIVLCGATHF ISLWTFFMHS KTVAVVMTIS KMLTAAVSCI
101: TALMLVHIIP DLLSVKTREL FLKTRAEELD KEMGLIIRQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLDLAECA LWMPCQGGLT LQLSHNLNNL
201: IPLGSTVPIN LPIINEIFSS PEAIQIPHTN PLARMRNTVG RYIPPEVVAV RVPLLHLSSF TNDWAELSTR SYAVMVLVLP MNGLRKWREH ELELVQVVAD
301: QVAVALSHAA ILEDSMRAHD QLMEQNIALD VARQEAEMAI RARNDFLAVM NHEMRTPMHA VIALCSLLLE TDLTPEQRVM IETILKSSNL LATLINDVLD
401: LSRLEDGILE LENGTFNLHG ILREAVNLIK PIASLKKLSI TLALALDLPI LAVGDAKRLI QILLNVAGNA VKFTKEGHIS IEASVAKPEY VRDCHPPEMF
501: PMPSDGQFYL RVQVRDTGCG ISPQDIPLVF TKFAEARPTS NRSTGGEGLG LAICRRFIQL MKGNIWIESE GSGKGTTVTF VVKLGICNHP NALPLLPVPP
601: RGRLNKGSDD LFRYKQFRGD DGGISVNAQR YQRSL

Best Arabidopsis Sequence Match ( AT2G40940.1 )
(BLAST)

001: MESCDCFETH VNQDDLLVKY QYISDALIAL AYFSIPLELI YFVQKSAFFP YKWVLMQFGA FIILCGATHF INLWMFFMHS KAVAIVMTIA KVSCAVVSCA
101: TALMLVHIIP DLLSVKNREL FLKKKADELD REMGLILTQE ETGRHVRMLT HGIRRTLDRH TILRTTLVEL GKTLCLEECA LWMPSQSGLY LQLSHTLSHK
201: IQVGSSVPIN LPIINELFNS AQAMHIPHSC PLAKIGPPVG RYSPPEVVSV RVPLLHLSNF QGSDWSDLSG KGYAIMVLIL PTDGARKWRD HELELVENVA
301: DQVAVALSHA AILEESMHAR DQLMEQNFAL DKARQEAEMA VHARNDFLAV MNHEMRTPMH AIISLSSLLL ETELSPEQRV MIETILKSSN LVATLISDVL
401: DLSRLEDGSL LLENEPFSLQ AIFEEVISLI KPIASVKKLS TNLILSADLP TYAIGDEKRL MQTILNIMGN AVKFTKEGYI SIIASIMKPE SLQELPSPEF
501: FPVLSDSHFY LCVQVKDTGC GIHTQDIPLL FTKFVQPRTG TQRNHSGGGL GLALCKRFVG LMGGYMWIES EGLEKGCTAS FIIRLGICNG PSSSSGSMAL
601: HLAAKSQTRP WNW

Arabidopsis Description

ERS1Ethylene response sensor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38846]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.