Factsheet for HORVU5Hr1G119650.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G001850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	HORVU4Hr1G001850.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G344200.1	Wheat	cytosol, golgi, plasma membrane	74.23	86.6
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	87.11	82.93
HORVU6Hr1G045040.2	Barley	cytosol	74.51	75.35
GSMUA_Achr11P...	Banana	cytosol	59.94	58.15
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	84.03	44.78
GSMUA_Achr11P...	Banana	cytosol	76.47	42.99
VIT_07s0005g00850.t01	Wine grape	cytosol	71.43	40.09
KRG96477	Soybean	cytosol	70.31	39.47
HORVU6Hr1G080170.1	Barley	plasma membrane	20.73	39.36
CDX80113	Canola	plasma membrane	67.51	39.31
Bra004449.1-P	Field mustard	plasma membrane	67.23	39.28
KRH68220	Soybean	cytosol	69.47	38.99
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	66.67	38.83
CDY63851	Canola	plasma membrane	67.51	38.68
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	68.35	38.24
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.06	37.78
Solyc09g075440.2.1	Tomato	plasma membrane	65.27	36.69
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	64.99	36.54
HORVU4Hr1G006260.4	Barley	plastid	64.15	35.67
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	45.94	21.11
HORVU2Hr1G000030.1	Barley	plasma membrane	45.66	21.03
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	43.98	19.1
HORVU6Hr1G071860.2	Barley	plasma membrane	37.53	18.56
HORVU6Hr1G080180.1	Barley	cytosol	16.25	11.53
HORVU4Hr1G008210.4	Barley	cytosol	14.01	4.98
HORVU3Hr1G094870.10	Barley	plasma membrane	13.73	4.68
HORVU2Hr1G106760.1	Barley	cytosol	7.84	4.48
HORVU6Hr1G077070.5	Barley	mitochondrion	12.32	4.19
HORVU7Hr1G030040.2	Barley	extracellular	5.6	1.93

Protein Annotations

EnsemblPlants:HORVU5Hr1G119650.1	EnsemblPlantsGene:HORVU5Hr1G119650	Gene3D:3.30.450.40	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:GAF	InterPro:GAF-like_dom_sf	InterPro:IPR029016
PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	PFAM:PF01590	SEG:seg	SMART:SM00065	SUPFAM:SSF55781
TMHMM:TMhelix	UniParc:UPI000B465E6C	UniProt:A0A287SXI8	MapMan:11.5.2.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:656387855..656393736

Molecular Weight (calculated)

39737.6 Da

IEP (calculated)

7.070

GRAVY (calculated)

0.217

Length

357 amino acids

Sequence
(BLAST)

001: MEGCHCIVES FQLTNELLIK YQYISDFFIA LAYFSIPLEL IYFAKKSSSF PYRWVLIQFS AFIVLCGTTH LINLWTFTMH TKTVDIIMTV AKVTTAVVSC
101: ATALTLIHII PDLLGVKTRE LFLKKKADEL DREMGLVRTQ EETGRHVRML IHEIRSTLDS HTILKTTLVG LGRTLGLEEC ALWMPSRSGS SLELTHTLRH
201: PTPAGSSVQI NLPVVNQVFS TNRAIIVPHT SPLARIRTVQ GRHVPLDVAA VRIPLLHLSN FQPELSAKSY GIMVLILPSD SARKWLAHEL ELIEVIADQV
301: AVALSHAAIL EESMRARDLL TEQNVALDLA LREAEMADNR ATTDSSASAA KVHNADP

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.