Factsheet for HORVU4Hr1G006260.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G001850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	HORVU4Hr1G001850.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	87.38	88.35
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	87.07	88.03
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	86.92	87.87
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	32.4	84.21
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	80.22	80.97
EER91030	Sorghum	cytosol	79.91	80.79
Zm00001d033642_P001	Maize	plasma membrane	79.59	80.6
Zm00001d013486_P001	Maize	plasma membrane	79.28	80.28
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	76.95	73.73
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.11	72.44
GSMUA_Achr11P...	Banana	cytosol	68.69	69.45
HORVU6Hr1G045040.2	Barley	cytosol	36.14	65.72
VIT_07s0005g00850.t01	Wine grape	cytosol	64.95	65.57
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	35.67	64.15
GSMUA_Achr11P...	Banana	cytosol	36.6	63.86
KRG96477	Soybean	cytosol	63.08	63.68
KRH68220	Soybean	cytosol	63.08	63.68
CDX80113	Canola	plasma membrane	59.66	62.48
Bra004449.1-P	Field mustard	plasma membrane	59.03	62.03
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	58.88	61.66
CDY63851	Canola	plasma membrane	59.81	61.64
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	58.88	59.25
Solyc09g075440.2.1	Tomato	plasma membrane	58.41	59.06
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	58.1	58.74
Zm00001d043247_P001	Maize	nucleus	22.9	44.14
Zm00001d013338_P002	Maize	cytosol	23.05	39.57
HORVU6Hr1G080170.1	Barley	plasma membrane	8.1	27.66
HORVU2Hr1G000030.1	Barley	plasma membrane	31.78	26.32
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	31.62	26.13
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	31.62	24.7
HORVU6Hr1G071860.2	Barley	plasma membrane	26.32	23.41
HORVU6Hr1G080180.1	Barley	cytosol	16.98	21.67
HORVU2Hr1G106760.1	Barley	cytosol	13.71	14.08
HORVU4Hr1G008210.4	Barley	cytosol	18.69	11.95
HORVU6Hr1G077070.5	Barley	mitochondrion	19.47	11.92
HORVU3Hr1G094870.10	Barley	plasma membrane	18.85	11.56
HORVU7Hr1G030040.2	Barley	extracellular	13.08	8.12

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	UniProt:A0A287N210	InterPro:GAF
InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023
InterPro:HATPase_C	InterPro:HATPase_C_sf	EnsemblPlantsGene:HORVU4Hr1G006260	EnsemblPlants:HORVU4Hr1G006260.4	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890	PFAM:PF00512	PFAM:PF01590
PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	SMART:SM00065
SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384	SUPFAM:SSF55781	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C
UniParc:UPI000B47C5C0	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:14812354..14816780

Molecular Weight (calculated)

70940.2 Da

IEP (calculated)

8.743

GRAVY (calculated)

-0.021

Length

642 amino acids

Sequence
(BLAST)

001: PSVCPRIWLP PFLPSFPFQR RFLLALPASP AVQPSGSSGR RAAGRGNVVT TDVVLKHQGW NDATASSRCG RLTSSSSSTL WTFTTHTKTV AMVMTVAKVS
101: TAVVSCATAL MLVHIIPDLL SVKTRELFLK NKAEELDWEM GLIRTQEETG RHVRMLTHEI RSTLDRHTIL KTTIVELGRT LGLEECALWM PSRSGSNLQL
201: SHTLRHQITV GSSISINLPV INQVFSSNRA IIIPHTSPLA RIRPLAGRYV PPEVAAVRVP LLNLSNFQIN DWPELSAKSY AIMVLMLPSD SARNWHVHEL
301: ELVEVVADQV AVALSHAAIL EESMRARDLL MEQNVALDLA RRDAETAIRA RNDFLAVMNH EMRTPMNAII ALSSLLLETE LTPEQRLMVE TVLKSSNLLA
401: TLINDVLDLS KLEDRSLELE IRAFNLHAVF KEVMGFIRPI AAIKRLSMSV MLAPDLPLCA IGDEKRLMQT ILNISGNAVK FTKEGHITLL ASILKPDSLR
501: EFRTPDFHPA ASDDHFYLKV QLKDTGCGIS PQDLPHVFTK FTQTQPGGNQ GYSGSGLGLA ICRRFVTLMG GHIWLDSEGA GRGCTATFIV RLGVSDNTDA
601: YRQQLTPLAW PGSANAESSG PKALHEERWP PSSLKPRYQR SV

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.