Factsheet for HORVU1Hr1G022550.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 1
endoplasmic reticulum 2
extracellular 1
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G001850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	HORVU4Hr1G001850.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G096600.1	Wheat	cytosol, golgi, plasma membrane	96.55	96.55
TraesCS1D01G105600.1	Wheat	cytosol, golgi, plasma membrane	96.39	96.24
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	96.08	96.08
Os05t0155200-01	Rice	plasma membrane	71.63	88.22
EES19059	Sorghum	plasma membrane	82.45	83.23
Zm00001d037604_P001	Maize	plastid	81.82	82.99
HORVU6Hr1G045040.2	Barley	cytosol	38.71	69.97
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	38.24	68.35
GSMUA_Achr5P00120_001	Banana	cytosol	37.77	67.32
VIT_07s0005g00850.t01	Wine grape	cytosol	66.93	67.14
CDX80113	Canola	plasma membrane	62.85	65.42
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	68.5	65.22
Bra004449.1-P	Field mustard	plasma membrane	62.23	64.98
Solyc09g075440.2.1	Tomato	plasma membrane	64.58	64.88
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	64.42	64.72
KRH68220	Soybean	cytosol	64.42	64.62
KRG96477	Soybean	cytosol	64.11	64.31
CDY63851	Canola	plasma membrane	62.7	64.21
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	61.29	63.78
HORVU4Hr1G006260.4	Barley	plastid	59.25	58.88
HORVU6Hr1G080170.1	Barley	plasma membrane	11.76	39.89
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	34.8	28.57
HORVU2Hr1G000030.1	Barley	plasma membrane	34.64	28.52
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	34.95	27.13
HORVU6Hr1G071860.2	Barley	plasma membrane	27.43	24.24
HORVU6Hr1G080180.1	Barley	cytosol	15.52	19.68
HORVU2Hr1G106760.1	Barley	cytosol	14.11	14.4
HORVU4Hr1G008210.4	Barley	cytosol	19.91	12.65
HORVU3Hr1G094870.10	Barley	plasma membrane	20.38	12.42
HORVU6Hr1G077070.5	Barley	mitochondrion	18.65	11.34
HORVU7Hr1G030040.2	Barley	extracellular	12.7	7.83

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	ncoils:Coil	InterPro:GAF
InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	EnsemblPlantsGene:HORVU1Hr1G022550	EnsemblPlants:HORVU1Hr1G022550.1
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890
UniProt:M0UZU6	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109
PANTHER:PTHR24423	PANTHER:PTHR24423:SF545	SMART:SM00065	SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384
SUPFAM:SSF55781	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	TMHMM:TMhelix	UniParc:UPI000296707E	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:96388027..96393798

Molecular Weight (calculated)

70323.9 Da

IEP (calculated)

7.315

GRAVY (calculated)

0.134

Length

638 amino acids

Sequence
(BLAST)

001: MDACDCIEPL WQADDLLVKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA FIVLCGATHL INLWTFATYS KTIAVVMTVA KAATAVVSCI
101: TALMLVHIIP DLLSVKLRER YLKDKAEELD KEMGIIRTQE ETGRHVHMLT HEIRSTLDRH TILRTTLVEL GRTLGLAECA LWMPSRSGTA LHLSHTIHNS
201: APIGLVVPIN LPVVSKIFNS NRAESIPHTS PLASIKADTS RYAPPEVVAV RVPLLHLTNF EINDWPDISA KSFAVMVLML PPDSARKWRT HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNIAL DAARREAEMA ICARNDFLAV MNHEMRTPMK AIVSLSSLLL ETTLTAEQRL MIETILKSSD FLATLTNDVL
401: DISKLGNGSL ELDIAPFDLH ATFTDVVNLI KPVAACKRLS VMVSLAPELP ACAIGDRKLL MQIMLNVAGN SIKFTKEGHV SIAASIARPD SLRDPYASNL
501: HPVPSDGSFY LVVQVKDTGC GIRPEDMAHT FRKFAHGENA TTKIHNGNGL GLALSRRFVD LMQGDIWLES EGVAKGCTAT FFVKLSTPKK PNANANPRRM
601: MAPLQPSKGA GGPGADALSI LTRDGDSRGP RARYQSIV

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.