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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400020285
PGSC0003DMT400021612
PGSC0003DMT400041983
PGSC0003DMT400044244
PGSC0003DMT400071109

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 PGSC0003DMT400041983 AT1G04310.1 18577522
AT1G04310.1 PGSC0003DMT400044244 AT1G04310.1 18577522
AT1G04310.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT1G04310.1 PGSC0003DMT400071109 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400071109 AT1G66340.1 18577522
AT3G23150.1 PGSC0003DMT400021612 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g053710.2.1 Tomato plasma membrane 98.29 98.29
VIT_05s0049g00090.t01 Wine grape plasma membrane 70.83 70.55
KRG90373 Soybean plasma membrane 41.66 69.37
KRH34517 Soybean plasma membrane 62.55 64.59
KRG92290 Soybean plasma membrane 64.13 64.04
PGSC0003DMT400044244 Potato plasma membrane 62.16 62.82
CDY35503 Canola plasma membrane 59.79 58.41
PGSC0003DMT400073847 Potato plasma membrane 58.74 58.28
Bra023756.1-P Field mustard plasma membrane 59.66 58.21
CDY70443 Canola plasma membrane 59.66 58.21
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 58.48 57.57
PGSC0003DMT400060160 Potato endoplasmic reticulum 57.69 57.54
GSMUA_Achr11P... Banana plasma membrane 56.64 56.86
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 54.8 55.09
KRG90374 Soybean cytosol 16.03 54.46
TraesCS2B01G023800.1 Wheat plasma membrane 50.33 49.8
TraesCS2D01G000500.1 Wheat plasma membrane 50.72 49.74
Os04t0169100-02 Rice plasma membrane 49.8 49.67
CDY67999 Canola plasma membrane 40.34 49.6
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 42.44 49.54
Bra015303.1-P Field mustard endoplasmic reticulum 40.08 49.51
TraesCS2A01G000200.1 Wheat plasma membrane 50.59 49.49
Zm00001d051889_P002 Maize endoplasmic reticulum 48.88 49.34
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 50.33 49.29
CDX86641 Canola endoplasmic reticulum 38.5 49.24
EES10426 Sorghum plasma membrane 49.8 49.03
HORVU2Hr1G000030.1 Barley plasma membrane 49.8 48.9
CDY70681 Canola endoplasmic reticulum 39.55 48.78
OQU85974 Sorghum plasma membrane 49.54 48.58
TraesCS6B01G439600.1 Wheat mitochondrion 49.93 48.47
TraesCS6D01G383600.1 Wheat mitochondrion 49.8 48.34
Zm00001d004372_P003 Maize plasma membrane 48.88 48.31
AT1G04310.1 Thale cress endoplasmic reticulum 40.87 48.22
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 49.54 46.6
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 49.15 46.52
HORVU6Hr1G080170.1 Barley plasma membrane 11.3 45.74
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 49.41 45.74
Os02t0820900-03 Rice mitochondrion 48.75 44.38
TraesCS6D01G266200.1 Wheat plasma membrane 39.82 41.74
TraesCS6A01G285800.1 Wheat plasma membrane 39.55 41.35
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 39.29 41.07
TraesCS6B01G314600.1 Wheat plasma membrane 39.29 41.02
TraesCS6A01G329400.1 Wheat plasma membrane 39.03 40.68
HORVU6Hr1G071860.2 Barley plasma membrane 38.5 40.58
TraesCS6D01G308300.1 Wheat plasma membrane 38.5 40.25
HORVU6Hr1G080180.1 Barley cytosol 25.62 38.77
Os07t0259100-01 Rice mitochondrion, plasma membrane 39.29 38.48
PGSC0003DMT400071109 Potato cytosol, endoplasmic reticulum, plasma membrane 37.06 38.32
PGSC0003DMT400020285 Potato endoplasmic reticulum, plasma membrane, plastid 37.84 38.2
PGSC0003DMT400081399 Potato cytosol, plasma membrane, vacuole 30.49 36.54
Zm00001d053594_P001 Maize plasma membrane 38.5 36.49
EES06508 Sorghum mitochondrion, plasma membrane 38.63 35.55
KXG36402 Sorghum plasma membrane 37.45 33.33
Zm00001d021687_P001 Maize plasma membrane 36.53 32.51
Bra030564.1-P Field mustard plasma membrane 44.15 19.96
CDY15498 Canola plasma membrane 44.42 19.77
PGSC0003DMT400084727 Potato cytosol, golgi, plasma membrane 10.91 15.43
PGSC0003DMT400075775 Potato endoplasmic reticulum, golgi, plasma membrane 19.97 15.32
PGSC0003DMT400015729 Potato cytosol 6.7 13.86
PGSC0003DMT400075949 Potato cytosol 15.11 11.34
PGSC0003DMT400009219 Potato plastid 16.69 10.49
PGSC0003DMT400011818 Potato extracellular, golgi, peroxisome 9.72 9.66
Protein Annotations
Gene3D:1.10.287.130EntrezGene:102591913MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300
ProteinID:AAQ90152ProteinID:AAQ90152.1EMBL:AY300040InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETR
InterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009873GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0018106GO:GO:0019538GO:GO:0023014GO:GO:0038023
GO:GO:0038199GO:GO:0046872GO:GO:0050896GO:GO:0051740InterPro:HATPase_CInterPro:HATPase_C_sf
InterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467InterPro:IPR029016
InterPro:IPR036890UniProt:M1BCB1PFAM:PF00072PFAM:PF00512PFAM:PF01590PFAM:PF02518
EnsemblPlantsGene:PGSC0003DMG400016284PGSC:PGSC0003DMG400016284EnsemblPlants:PGSC0003DMT400041983PIRSF:PIRSF026389PFscan:PS50109PFscan:PS50110
PANTHER:PTHR43719PANTHER:PTHR43719:SF6SMART:SM00065SMART:SM00388SMART:SM00448SUPFAM:SSF47384
SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI000296F014RefSeq:XP_006350680.1SEG:seg:::
Description
Ethylene receptor [Source:PGSC_GENE;Acc:PGSC0003DMG400016284]
Coordinates
chr6:-:39789897..39794657
Molecular Weight (calculated)
85155.0 Da
IEP (calculated)
7.424
GRAVY (calculated)
0.025
Length
761 amino acids
Sequence
(BLAST)
001: MLRTLASALL VLSFFVSLSA ADNGFPRCNC DDEGFWSIES ILECQKISDL FIAIAYFSIP IELLYFVSCS NFPFKWVLFQ FIAFIVLCGM THLLNFWTYY
101: GQHPFQLMLA LTIFKVLTAL VSFATAITLI TLFPMLLKIK VREFMLKKKT WDLGREVGLI KMQKETGWHV RMLTQEIRKS LDRHTILHTT LVELSKTLDL
201: HNCAVWKPNE NKTEMNLIHE LRDNSFNSAY NLPIPRSDPD VIQIKEIDGV KILDADSPLA VASSGGSREP GAVAAIRMPM LKVSNFKGGT PELVPECYAI
301: LVLVLPGEQG RSWSSQEIEI VRVVADQVAV ALSHAAILEE SQHMRETLEE QNRALQQAKQ DALRASQARN AFQMVMSHGL RRPMHSILGL LSLLQDEKLG
401: NEQRLLVDSM VKTSNVVSTL IDDVMDTSTK DNGRFPLEMR HFQLHSMIKE AACLAKCLCA YRGYNISIEV DKSLPNHVLG DERRVFQVIL HMVGNLLKDP
501: NGGLLTFRVL PESISREGIG GAWRTRRSNS SRDNAYIRFE VGTSNNHSQP EGTTLPHYRP KRCSKEMDEG LSFTVCRKLV QLMQGDIWVI PNPEGFDQSM
601: AVVLGLQLRP SIAIGIPEYG ESSDHSHPHS LLQGVKVLLA DYDDVNRAVT SKLLEKLGCS VSAVSSGRDC IGVLSPAVSS FQIVLLDLHL PDLDGFEVTM
701: RIRKFGSRNW PLIVGLTATA DENVTGRCLQ IGMNGLIRKP VLLPGIADEL QRVLLRGSRM M
Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.