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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G000200.1
TraesCS2B01G023800.1
TraesCS2D01G000500.1
TraesCS4A01G302000.1
TraesCS4B01G012100.1
TraesCS4D01G010200.1
TraesCS6A01G285800.1
TraesCS6A01G329400.1
TraesCS6A01G399400.2
TraesCS6B01G314600.1
TraesCS6B01G360200.1
TraesCS6B01G439600.1
TraesCS6D01G266200.1
TraesCS6D01G308300.1
TraesCS6D01G383600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 TraesCS2A01G000200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2B01G023800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2D01G000500.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G285800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G329400.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G399400.2 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G314600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G360200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G439600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G266200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G308300.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G383600.1 AT1G04310.1 18577522
AT3G23150.1 TraesCS4A01G302000.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4B01G012100.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4D01G010200.1 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G000500.1 Wheat plasma membrane 98.84 99.1
TraesCS2B01G023800.1 Wheat plasma membrane 97.04 98.18
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 93.19 93.31
HORVU2Hr1G000030.1 Barley plasma membrane 91.77 92.13
Os04t0169100-02 Rice plasma membrane 80.72 82.31
EES10426 Sorghum plasma membrane 79.31 79.82
Zm00001d004372_P003 Maize plasma membrane 76.74 77.53
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 78.79 76.24
GSMUA_Achr11P... Banana plasma membrane 61.83 63.46
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 61.05 62.75
VIT_14s0081g00630.t01 Wine grape plasma membrane 55.4 56.71
VIT_05s0049g00090.t01 Wine grape plasma membrane 53.34 54.32
PGSC0003DMT400073847 Potato plasma membrane 52.57 53.32
Solyc11g006180.1.1 Tomato plasma membrane 51.93 52.67
Solyc05g055070.2.1 Tomato plasma membrane 50.39 52.62
PGSC0003DMT400060160 Potato endoplasmic reticulum 50.9 51.9
Solyc06g051610.1.1 Tomato cytosol 11.05 51.81
Solyc11g065590.1.1 Tomato cytosol 5.91 51.11
Solyc06g053710.2.1 Tomato plasma membrane 49.74 50.85
PGSC0003DMT400041983 Potato plasma membrane 49.49 50.59
TraesCS6A01G329400.1 Wheat plasma membrane 47.17 50.27
Solyc06g036450.1.1 Tomato cytosol 6.43 50.0
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 51.54 49.57
CDY35503 Canola plasma membrane 49.49 49.42
CDY70443 Canola plasma membrane 49.49 49.36
Bra040134.1-P Field mustard plasma membrane 48.59 49.35
CDY30004 Canola plasma membrane 48.59 49.35
TraesCS6A01G285800.1 Wheat plasma membrane 46.14 49.31
Bra023756.1-P Field mustard plasma membrane 49.36 49.23
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 48.84 49.16
AT3G04580.1 Thale cress plasma membrane 48.2 48.96
Solyc12g044870.1.1 Tomato cytosol 10.41 48.8
TraesCS4A01G344200.1 Wheat cytosol, golgi, plasma membrane 18.89 48.04
Solyc09g082910.1.1 Tomato cytosol 10.03 46.99
Solyc04g049990.1.1 Tomato cytosol 7.84 46.56
PGSC0003DMT400044244 Potato plasma membrane 44.86 46.35
Solyc09g089610.2.1 Tomato endoplasmic reticulum 44.47 45.89
Bra015303.1-P Field mustard endoplasmic reticulum 35.22 44.48
CDY64702 Canola mitochondrion 7.46 44.27
CDY67999 Canola plasma membrane 35.09 44.1
CDY70681 Canola endoplasmic reticulum 34.83 43.92
Solyc09g011680.1.1 Tomato cytosol 5.78 43.27
CDX86641 Canola endoplasmic reticulum 32.9 43.03
AT1G04310.1 Thale cress endoplasmic reticulum 35.48 42.79
KRH31729 Soybean endoplasmic reticulum 12.85 41.84
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 5.91 41.82
Solyc01g014770.1.1 Tomato cytosol 7.2 41.79
Solyc04g025660.1.1 Tomato cytosol 5.53 41.35
Solyc08g068360.1.1 Tomato cytosol 6.04 39.17
Solyc12g062760.1.1 Tomato cytosol 4.37 38.64
TraesCS5A01G002600.1 Wheat cytosol, plasma membrane, vacuole 30.33 37.28
Solyc04g064840.1.1 Tomato endoplasmic reticulum 8.61 37.02
TraesCS4A01G274300.1 Wheat cytosol, golgi, plasma membrane 29.82 36.54
CDY21123 Canola cytosol 14.01 36.33
Solyc12g027610.1.1 Tomato cytosol 8.74 34.87
TraesCS1A01G096600.1 Wheat cytosol, golgi, plasma membrane 28.41 34.64
Solyc12g038690.1.1 Tomato cytosol 2.7 32.81
Solyc09g065310.1.1 Tomato cytosol 2.57 31.25
Bra030564.1-P Field mustard plasma membrane 38.05 17.59
CDY15498 Canola plasma membrane 38.43 17.49
TraesCS4A01G264800.1 Wheat cytosol, peroxisome, plasma membrane 17.1 13.31
TraesCS3A01G433200.1 Wheat peroxisome 16.84 13.06
TraesCS6A01G312500.2 Wheat cytosol 16.07 12.66
TraesCS2A01G472800.2 Wheat nucleus 8.1 10.48
TraesCS7A01G498200.2 Wheat nucleus 12.47 10.02
TraesCS4A01G340900.1 Wheat endoplasmic reticulum, golgi 8.74 9.26
TraesCS7A01G146600.1 Wheat plasma membrane 10.93 7.86
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300InterPro:CheY-like_superfamily
ncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160
GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004674GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0005975GO:GO:0006139GO:GO:0006355GO:GO:0006464GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009723
GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0038023GO:GO:0038199GO:GO:0050896GO:GO:0051740GO:GO:2000904InterPro:HATPase_C_sf
InterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890
PFAM:PF00072PFAM:PF01590PIRSF:PIRSF026389PFscan:PS50109PFscan:PS50110PANTHER:PTHR43719
PANTHER:PTHR43719:SF6SMART:SM00065SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781
SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS2A01G000200EnsemblPlants:TraesCS2A01G000200.1
TIGR:cd00156SEG:seg::::
Description
No Description!
Coordinates
chr2A:-:259156..262109
Molecular Weight (calculated)
86708.8 Da
IEP (calculated)
6.670
GRAVY (calculated)
0.061
Length
778 amino acids
Sequence
(BLAST)
001: MVEPMAARAM RPFPCCLISL LLLLLLLLPP LPLSRAATGD FSHCGGCDDA DEGSLWSTDN ILQCQKVSDF LIATAYFSIP LELLYFTTCS DLFPLKWIVL
101: QFGAFIVLCG LTHLINVFTY EPHSFHLVLA LTVAKFLTAL VSFATAITLL TLIPQLLRVK VRENFLRIKA RELDQEVGKM KRQEEASWHV RMLTQEIRKS
201: LDRHTILYIT MVELSKTLHL QNCAVWMPNE ARTHMILTHH LREREITESH SGSIPISDPD VVEIKATRGA KVLGEGSALG TASRCNPEAG AAVAAIRMPM
301: LRVSNFKGGT PEMMETSYAI LVLVLPEDGS LGWGEQELEI VEVIADQVAV ALSHAAVLEE SQLMREKLAQ QHRDLLQAKH EAVMATEARN SFQSAMYDGM
401: RRPMHSVLGL VSMMQQESMN PEQRLVMDAI VKTTSVASTL MNDVMQTSTM DREHLSLVRR PFSLHSLIKE AVSVVRCLCG SKGVDFEFQV ENSLPERVVG
501: DEKRVFHIVL HMVGTLINQC RAGCLSLYVN SYNEMDERHN NQDWMLLRRA NFSAGYVCVK FEIRIKKSRN SLLDASASQI SQEPNASSSE MGLSFNMCKK
601: IVQMMNGNIW SVSDPEGLRE TVMLALQFQM QHVTPVSGAS SDLYRLSPIP NFNGLHVLLV DGDDTNRAVT HKLLEKLGCR VFSVSSGIQC MTSFAGGESS
701: FQLVLLDLTM HTMDGFEVAL AIRKFRSNSW PPLIVALAAS SDDNVRDRCQ RSGINGLLQK PVTLAALGDE VYRVLQHN
Best Arabidopsis Sequence Match ( AT3G04580.2 )
(BLAST)
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Arabidopsis Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.